Hi,
I'm trying to set up a new Mart with attached genomic sequence, but I
can't seem to find any documentation on how the sequence_mart database
is supposed to be set up. In particular, I'm confused as to how table
fields map to attributes in MartExplorer; looking at Ensembl's
sequence_mart_38, I see a agambiae_gene_ensembl_structure.str_chrom_name
attribute, but I can't find the associated str_chrom_name field anywhere.
Is there a better way to be building a new mart? (I've seen mention of
MartBuilder, is it in a usable state?) Any documentation for
sequence_mart databases?
Thanks,
E.O. Stinson
VectorBase.org