On Tue, 22 Aug 2006, Nassib Nassar wrote: > Has anyone had experience accessing a local mart containing a local > copy of Ensembl 39 or SNP 39 via Taverna (1.4)? They work fine for us > when directly accessing the web interface of biomart-dev (latest > version). In Taverna we are able to add any of the databases to a > workflow model, but when trying to configure the BioMart query, > Taverna hangs indefinitely on "Fetching dataset configuration."
Hi Nassib, I have forwared your question to Tom in the Taverna team as he probably knows the most about this. I have no clue how Taverna generates its martservices requests so I am a bit stuck knowing how to answer. Best wishes Damian > > From looking at the server logs, it seems that Taverna makes many > calls to martservice and hangs somewhere in the middle of that (using > no CPU - just hanging). This is very different from biomart-dev which > doesn't make these calls at the query configuration page. > > Nassib >
