On 5 Oct 2006, at 13:53, Alexandre Gattiker wrote:
Hi Arek,
This problem keeps popping up on the ensembl-dev and mart-dev lists.
In my place, CVS works fine on one server but always gives the "pam"
error on another, and there is no obvious explanation. CVS does work
with other repositories (e.g. cvs.gnu.org).
Have the Sanger admins tried this?
http://ch.tudelft.nl/~arthur/cvsd/faq.html#authresponse
I don't know :-) but I will forward your suggestion there
a.
Cheers
Alexandre
Arek Kasprzyk wrote:
On 5 Oct 2006, at 11:52, frank gibson wrote:
Hi
I am trying to connect to CVS and download the biomart modules and I
get the following error. Is this problem at my end or your end?
I was also wondering if there was a debian package for biomart.
Thanks
Frank
$ cvs -d :pserver:[EMAIL PROTECTED]:/cvsroot/CVSmaster login
Logging in to
:pserver:[EMAIL PROTECTED]:2401/cvsroot/CVSmaster
CVS password:
PAM start error: Critical error - immediate abort
Fatal error, aborting.
cvs [login aborted]: unrecognized auth response from
cvsro.sanger.ac.uk: pam failed to release authenticator
Hi Frank
I just checked the cvs checkout and appears to be working correctly.
I note that you are trying to connect to an old cvs server. Try to
follow
the instructions from http://www.biomart.org/biomart_website1.html#bio
ei
# Log into the Sanger CVS server (using a password of CVSUSER ):
$ cvs -d :pserver:[EMAIL PROTECTED]:/cvsroot/CVSmaster login
# Check the BioMart web code out of CVS:
$ cvs -d :pserver:[EMAIL PROTECTED]:/cvsroot/CVSmaster \
co -r release-0_4 biomart-web
a.
----------------------------------------------------------------------
--------- Arek Kasprzyk
EMBL-European Bioinformatics Institute.
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
Tel: +44-(0)1223-494606
Fax: +44-(0)1223-494468
----------------------------------------------------------------------
---------
--
Alexandre Gattiker
Swiss Institute of Bioinformatics, Genome Bioinformatics Group
Biozentrum Tel. +41 61 267 1579
Klingelbergstrasse 50 Fax +41 61 267 1585
4056 Basel [EMAIL PROTECTED]
Switzerland http://www.biozentrum.unibas.ch/primig
------------------------------------------------------------------------
-------
Arek Kasprzyk
EMBL-European Bioinformatics Institute.
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
Tel: +44-(0)1223-494606
Fax: +44-(0)1223-494468
------------------------------------------------------------------------
-------
