Hi Matthew
couple of questions,
On Thu, 2007-06-28 at 15:35 +1000, Matthew Hobbs wrote:
> Hi,
>
> I have just upgraded to BioMart 0.6 on my Windows XP testing machine and
> have been updating my dataset configurations. Things seem to work...
> for one session only.
Have you installed BioMart on Windows based system ? or is it just the
browser (client) running from Windows ? I can see from the backslashes
(\) in the error lines below that it looks you have installed it on
Windows.
>
> With the first session after running the configure script with --clean
> and restarting apache I notice this:
>
> ==> logs/error_log <==
> Argument "" isn't numeric in numeric gt (>) at
> \C\cygwin\usr\local\BioMart\biomart-perl\conf\templates\default\summarypanel.ttc
>
> line 25.
>
> This line 25 looks like this:
>
> if ($stash->get(['session', 0, 'param', [ 'dataset' ], 'size', 0])
> > 0) {
For session management, are you using default settings from
biomart-perl/conf/settings.conf or you have changed section about
settings.conf ?
>
> Nevertheless, the session goes fine and I can set filters, attributes
> and get a resuult. Subsequently if iin the browser I press the New
> button I only get the last page of the first session, and get this sort
> of error:
>
> Use of uninitialized value in concatenation (.) or string at
> C:/cygwin/usr/local/BioMart/biomart-perl/lib/BioMart/Web.pm line 1762.
> Use of uninitialized value in numeric eq (==) at
> c:/Perl/lib/CGI/Cookie.pm line 26.
These are probably warnings, shouldnt be a serious problem.
> Please, how can I investigate this further?
Cheers
Syed
> Thanks,
>
>
> Matthew
>
>
>
--
======================================
Syed Haider.
EMBL-European Bioinformatics Institute
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
======================================
