Hello,
I'm trying to configure BioMart 0.6 to work with two MartDBLocations
(both connecting to a different Oracle schema), but I can't get it to
work.
During the configuration, it looks like datasets from the second schema
are incorrectly looked up in the first schema (but of course nothing is
found).
The configuration runs fine with only 1 MartDBLocation (I tried both
individually and they work). Could there be a bug in the parsing of the
MartRegistry code when there is more than 1 MartDBLocation ?
This is my registry xml file, I think the syntax is fine:
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE MartRegistry>
<MartRegistry>
<virtualSchema name="default" visible="0">
<MartDBLocation name = "TAX_NCBI"
displayName = "TAX_NCBI"
databaseType = "oracle"
host = "host1"
port = "1521"
database = "db1"
schema = "tax_ncbi"
user = "tax_ncbi"
password = "xxx"
visible = "1"
includeDatasets = ""
martUser = ""
default = "0"
/>
<MartDBLocation
name = "MART"
displayName = "MART"
databaseType = "oracle"
host = "host1"
port = "1521"
database = "db1"
schema = "mart"
user = "mart"
password = "xxx"
visible = "1"
includeDatasets = ""
martUser = ""
default = "1"
/>
</virtualSchema>
</MartRegistry>
Thanks,
Matthias
