Isabelle Phan wrote:
Hello Syed,
I am selecting Ensembl attributes:
Ensembl Gene ID
Gene name
Chromosome name
over all genes (no filter). I notice that as soon as I run a BioMart
query, before I do any selection, the log looks as if it is looking up
all data from BioMart until the exception is thrown.
I am running Taverna 1.7 out of the box; perhaps I should allocate more
memory for the java virtual machine (taverna sets the default to 300M) ?
Hi Isabelle,
Could you send the workflow so I can try and reproduce the problem here.
Which version of java are you using?
David.
--
David Withers
School of Computer Science, University of Manchester,
Oxford Road, Manchester, M13 9PL, UK.
+44 (0)161 275 0683
