Got you, the filters I was using was gene entries to be split on ','.
however, chromosomal regions have colon in the filter values which gets
treated in java script as array separators, therefore, lose the original
data values and it says 'ARRAY' :) We need to fix it, thanks for
spotting it Olivier.
Cheers
Syed
Olivier Arnaiz wrote:
Hi Syed,
I have tried with 'Multiple Chromosomal Regions' not with the Gene ID
list. Maybe it is different.
I generate this url :
http://www.biomart.org/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=hsapiens_gene_ensembl.default.feature_page.ensembl_gene_id|hsapiens_gene_ensembl.default.feature_page.ensembl_transcript_id&FILTERS=hsapiens_gene_ensembl.default.filters.chromosomal_region
<http://www.biomart.org/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=hsapiens_gene_ensembl.default.feature_page.ensembl_gene_id|hsapiens_gene_ensembl.default.feature_page.ensembl_transcript_id&FILTERS=hsapiens_gene_ensembl.default.filters.chromosomal_region>."1:10000:1000000:1,2:20000:2000000:1"&VISIBLEPANEL=resultspanel
And I have ARRAY() in the box.
Thanks
Olivier
Le 2 févr. 09 à 16:24, Syed Haider a écrit :
Hi Olivier,
The following I have just generated from URL button and as i paste it
back to browser, i see the 'Gene ID LIST' box populated correctly. I
am not sure if I am with you, please explain.
http://www.biomart.org/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=hsapiens_gene_ensembl.default.feature_page.ensembl_gene_id|hsapiens_gene_ensembl.default.feature_page.ensembl_transcript_id&FILTERS=hsapiens_gene_ensembl.default.filters.ensembl_gene_id
<http://www.biomart.org/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=hsapiens_gene_ensembl.default.feature_page.ensembl_gene_id|hsapiens_gene_ensembl.default.feature_page.ensembl_transcript_id&FILTERS=hsapiens_gene_ensembl.default.filters.ensembl_gene_id>."ENSG00000208234,ENSG00000208238,ENSG00000208231"&VISIBLEPANEL=resultspanel
Thanks.
Syed
Olivier Arnaiz wrote:
Hi all,
When I try a query using multipleValues (ID-list) ... I obtain the
good results.
But after when I paste the url given by the URL button, I have
'ARRAY(...)' in the box "multipleValues".
I think that should be a bug.
Thanks
Olivier
--
Olivier Arnaiz
CGM-CNRS
91198 Gif-sur-Yvette
01 69 82 43 75
ParameciumDB:
http://paramecium.cgm.cnrs-gif.fr/
--
Olivier Arnaiz
CGM-CNRS
91198 Gif-sur-Yvette
01 69 82 43 75
ParameciumDB:
http://paramecium.cgm.cnrs-gif.fr/
