Dear BioMart Team, Recently I have problems with executing some types of the queries under Perl BioMart API. For queries such as retrieving orthologues/paralogues there are no problems. (EnsEMBL database)
They start when I'm trying sth bigger like transcripts and peptide sequences of genes. After retrieving between 20-70 rows (peptide sequence, gene id and transcripts id) I receive a message: "Problems with the web server: 500 read timeout" Some time ago with the same code I had no problems. Best wishes, -- Paweł Łabaj Chair of Bioinformatics Department of Biotechnology Boku University Vienna A-1190 Muthgasse 18 Austria, Europe
