Hi,

I am just about to release the first production version of the new
InterPro Biomart.  I am making use of the URL facility to create
direct links from the existing InterPro web site to the BioMart.  The
problem I am experiencing is that the order of attributes specified in
the URL is ignored in the results column order.

As an example of the problem, see:

Tiny URL: http://tinyurl.com/ljosra

which maps to:

http://wwwdev.ebi.ac.uk/interpro/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=entry.default.entry_attributes.entry_id|entry.default.entry_attributes.entry_short_name|entry.default.entry_attributes.entry_name|entry.default.entry_attributes.protein_id|entry.default.entry_attributes.protein_name|entry.default.entry_attributes.pos_from|entry.default.entry_attributes.pos_to|entry.default.entry_attributes.match_score|entry.default.entry_attributes.protein_tax_id|entry.default.entry_attributes.taxonomy_full_name&FILTERS=entry.default.filter_page.entry_id.%22IPR000001%22&VISIBLEPANEL=resultspanel

The url lists the attributes in the order EntryId, Entry short name,
Entry Name, Protein ID, Protein Name, Start position, End position,
Match score, Taxonomy ID, Taxonomic name

which is completely different to the order in which they are displayed.

 I have looked in the mart-dev mailing list history and found some
reference to attribute order posted a couple of years ago, but no
mention since, so perhaps this is a configuration issue that I need to
correct?

best regards,

Phil.


-- 
Phil Jones
Senior Software Engineer
InterPro Team
PANDA Group, EMBL-EBI
Wellcome Trust Genome Campus
Hinxton, Cambridge, CB10 1SD
UK.

Work phone: +44 1223 492685 (New number, as of 13 / 3 / 09)
Skype: philip-jones

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