The Ensembl Genomes team is pleased to announce the availability of
BioMarts for Ensembl Genomes Release 3 data. Ensembl Genomes Release 3
includes the first release of the divisions Ensembl Fungi and Ensembl
Plants which complete the span of Ensembl Genomes portals across the
taxonomic space, complementing the coverage of vertebrate genomes
available through Ensembl.
Ensembl Fungi includes a new build of the Sacchromyces cerevisiae genome
using the latest data from SGD, including variation data derived from
the Saccharomyces Genome Resequencing Project; and data for
Schizosaccharomyces pombe (built in collaboration with GeneDB_Spombe)
and eight species of Aspergillus (built in collaboration with the
Central Aspergillus Database Repository, CADRE). Ensembl Plants has
been built in collaboration with Gramene and includes the genomes of six
monocots and two dicots. Variation data is also available for four of
these plant species.
BioMart access is provided via martview installations at:
http://bacteria.ensembl.org/biomart/martview
http://protists.ensembl.org/biomart/martview
http://fungi.ensembl.org/biomart/martview
http://metazoa.ensembl.org/biomart/martview
http://plants.ensembl.org/biomart/martview
also via anonymous access at the public MySQL instance mysql.ebi.ac.uk
(port 4157) and lastly via BioMartCentral at biomart.org.
More information on Ensembl Genomes is available at:
http://www.ensemblgenomes.org/
--
Dan Staines, PhD Ensembl Genomes Technical Coordinator
EMBL-EBI Tel: +44-(0)1223-492507
Wellcome Trust Genome Campus Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK http://www.ensemblgenomes.org/
