Hi all,
I need your precious help one more time !
Creating pointer attributes in MartEditor (duplicates attributes
needed), some of them are not displayed in MartView...
Configuration xml file (retreive from meta_conf__xml__dm table) contains:
<DatasetConfig dataset="draft8" datasetID="1" displayName="Genotypes" interfaces="default" internalName="default"
martUsers="default" modified="2009-11-10 09:28:22" softwareVersion="0.6" template="draft8" type="TableSet" visible="1">
...
<AttributePage displayName="SNPs" internalName="snp_page"
outFormats="html,txt,csv,tsv,xls">
...
<AttributeDescription displayName="Chromosome (draft8)" field="seq_region_name" internalName="seq_region_name"
key="snp_id_key" maxLength="30" tableConstraint="draft8__snp_details__dm" />
<AttributeDescription displayName="Position on chromosome (bp) (draft8)" field="position"
internalName="position" key="snp_id_key" maxLength="11" tableConstraint="draft8__snp_details__dm" />
<AttributeDescription displayName="Chromosome (Netherlands draft9)" field="draft9NL_chr"
internalName="seq_region_name_9NL" key="snp_id_key" maxLength="30"
tableConstraint="draft8__snp_details__dm" />
<AttributeDescription displayName="Position on chromosome (bp) (Netherlands draft9)" field="draft9NL_pos"
internalName="position_9NL" key="snp_id_key" maxLength="11" tableConstraint="draft8__snp_details__dm"
/>
...
</AttributePage>
<AttributePage displayName="DRAFT8" internalName="draft8_page"
outFormats="html,txt,csv,tsv,xls">
...
<AttributeDescription internalName="seq_region_name_draft8" pointerAttribute="seq_region_name"
pointerDataset="draft8" pointerInterface="default" />
<AttributeDescription internalName="position_draft8" pointerAttribute="position"
pointerDataset="draft8" pointerInterface="default" />
...
</AttributePage>
<AttributePage displayName="DRAFT9" internalName="draft9_page"
outFormats="html,txt,csv,tsv,xls">
...
<AttributeDescription internalName="chr_draft9NL" pointerAttribute="seq_region_name_9NL"
pointerDataset="draft8" pointerInterface="default" />
<AttributeDescription internalName="pos_draft9NL" pointerAttribute="position_9NL"
pointerDataset="draft8" pointerInterface="default" />
...
</AttributePage>
...
</DatasetConfig>
In martview pointer attributes 'seq_region_name_draft8' and
'position_draft8' are displayed, whereas pointer attibutes
'chr_draft9NL' and 'pos_draft9NL' aren't displayed.
Please, note that I exported configuration from MartEditor, reconfugured
biomart with --clean option and restarted apache.
There aren't error message in error.log.
How can I find the source of the problem and solve it ?
Thanks for help.
Regards.
Jennifer
