Hi Trevor
This limit also applies to the martservice requests but you may be
able to modify the perl script to run the query in batches of 4
species at a time to get around this.
Regards
Rhoda
On 26 Jan 2010, at 10:20, trevor paterson (RI) wrote:
Listing Homolog attributes for a query in the ensembl biomart web
interface has a limit of 5 ortholog sets...
i.e/ it returns an error message if you select more than 5
‘Validation Error: Too many groups select for homologs Max allowed :
5’
Does this limit also apply to direct web service requests?
Or will I be able to construct a query for all orthologs for a given
ensembl gene?
Trevor Paterson PhD
new email [email protected]
Bioinformatics
The Roslin Institute
Edinburgh University
Scotland EH25 9PS
phone +44 (0)131 5274197
http://www.roslin.ed.ac.uk
http://www.resspecies.org
http://www.thearkdb.org
http://www.comparagrid.org
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