Revision: 8680
http://matplotlib.svn.sourceforge.net/matplotlib/?rev=8680&view=rev
Author: efiring
Date: 2010-09-05 00:43:25 +0000 (Sun, 05 Sep 2010)
Log Message:
-----------
Merged revisions 8679 via svnmerge from
https://matplotlib.svn.sourceforge.net/svnroot/matplotlib/branches/v1_0_maint
........
r8679 | efiring | 2010-09-04 14:38:45 -1000 (Sat, 04 Sep 2010) | 2 lines
[3024007] Fix ancient bug in hist inherited from numpy, fixed in numpy 1.5
........
Modified Paths:
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trunk/matplotlib/lib/matplotlib/axes.py
Property Changed:
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trunk/matplotlib/
trunk/matplotlib/doc/pyplots/README
trunk/matplotlib/doc/sphinxext/gen_gallery.py
trunk/matplotlib/doc/sphinxext/gen_rst.py
trunk/matplotlib/examples/misc/multiprocess.py
trunk/matplotlib/examples/mplot3d/contour3d_demo.py
trunk/matplotlib/examples/mplot3d/contourf3d_demo.py
trunk/matplotlib/examples/mplot3d/polys3d_demo.py
trunk/matplotlib/examples/mplot3d/scatter3d_demo.py
trunk/matplotlib/examples/mplot3d/surface3d_demo.py
trunk/matplotlib/examples/mplot3d/wire3d_demo.py
trunk/matplotlib/lib/matplotlib/sphinxext/mathmpl.py
trunk/matplotlib/lib/matplotlib/sphinxext/only_directives.py
trunk/matplotlib/lib/matplotlib/sphinxext/plot_directive.py
trunk/matplotlib/lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.png
Property changes on: trunk/matplotlib
___________________________________________________________________
Modified: svnmerge-integrated
- /branches/mathtex:1-7263 /branches/v0_91_maint:1-6428
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/trunk/matplotlib:1-7315
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Modified: svn:mergeinfo
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Property changes on: trunk/matplotlib/doc/pyplots/README
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Modified: svn:mergeinfo
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Property changes on: trunk/matplotlib/doc/sphinxext/gen_gallery.py
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Modified: svn:mergeinfo
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Property changes on: trunk/matplotlib/doc/sphinxext/gen_rst.py
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Modified: svn:mergeinfo
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Property changes on: trunk/matplotlib/examples/misc/multiprocess.py
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Modified: svn:mergeinfo
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Property changes on: trunk/matplotlib/examples/mplot3d/contour3d_demo.py
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Modified: svn:mergeinfo
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/branches/v0_98_5_maint/examples/mplot3d/wire.py:6581,6585,6587,6589-6609,6614,6616,6625,6652,6660-6662,6672-6673,6714-6715,6717-6732,6752-6754,6761-6773,6781,6792,6800,6802,6805,6809,6811,6822,6827,6850,6854,6856,6859,6861-6873,6883-6884,6886,6890-6891,6906-6909,6911-6912,6915-6916,6918,6920-6925,6927-6928,6934,6941,6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080
/branches/v0_99_maint/examples/mplot3d/wire3d_demo.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/examples/mplot3d/wire3d_demo.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677,8679
Modified: trunk/matplotlib/lib/matplotlib/axes.py
===================================================================
--- trunk/matplotlib/lib/matplotlib/axes.py 2010-09-05 00:38:45 UTC (rev
8679)
+++ trunk/matplotlib/lib/matplotlib/axes.py 2010-09-05 00:43:25 UTC (rev
8680)
@@ -7466,6 +7466,12 @@
pdf, bins, patches = ax.hist(...)
print np.sum(pdf * np.diff(bins))
+ .. Note:: Until numpy release 1.5, the underlying numpy
+ histogram function was incorrect with *normed*=*True*
+ if bin sizes were unequal. MPL inherited that
+ error. It is now corrected within MPL when using
+ earlier numpy versions
+
*weights*
An array of weights, of the same shape as *x*. Each value in
*x* only contributes its associated weight towards the bin
@@ -7647,7 +7653,10 @@
xmax = max(xmax, xi.max())
range = (xmin, xmax)
- hist_kwargs = dict(range=range, normed=bool(normed))
+ #hist_kwargs = dict(range=range, normed=bool(normed))
+ # We will handle the normed kwarg within mpl until we
+ # get to the point of requiring numpy >= 1.5.
+ hist_kwargs = dict(range=range)
if np.__version__ < "1.3": # version 1.1 and 1.2
hist_kwargs['new'] = True
@@ -7656,8 +7665,21 @@
# this will automatically overwrite bins,
# so that each histogram uses the same bins
m, bins = np.histogram(x[i], bins, weights=w[i], **hist_kwargs)
+ if normed:
+ db = np.diff(bins)
+ m = (m.astype(float) / db) / m.sum()
n.append(m)
+ if normed and db.std() > 0.01 * db.mean():
+ warnings.warn("""
+ This release fixes a normalization bug in the NumPy histogram
+ function prior to version 1.5, occuring with non-uniform
+ bin widths. The returned and plotted value is now a density:
+ n / (N * bin width),
+ where n is the bin count and N the total number of points.
+ """)
+
+
if cumulative:
slc = slice(None)
if cbook.is_numlike(cumulative) and cumulative < 0:
Property changes on: trunk/matplotlib/lib/matplotlib/sphinxext/mathmpl.py
___________________________________________________________________
Modified: svn:mergeinfo
- /branches/v0_91_maint/doc/sphinxext/mathmpl.py:5753-5771
/branches/v0_98_5_maint/lib/matplotlib/sphinxext/mathmpl.py:6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080,7176,7209-7211,7227,7245
/branches/v0_99_maint/lib/matplotlib/sphinxext/mathmpl.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/lib/matplotlib/sphinxext/mathmpl.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677
+ /branches/v0_91_maint/doc/sphinxext/mathmpl.py:5753-5771
/branches/v0_98_5_maint/lib/matplotlib/sphinxext/mathmpl.py:6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080,7176,7209-7211,7227,7245
/branches/v0_99_maint/lib/matplotlib/sphinxext/mathmpl.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/lib/matplotlib/sphinxext/mathmpl.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677,8679
Property changes on:
trunk/matplotlib/lib/matplotlib/sphinxext/only_directives.py
___________________________________________________________________
Modified: svn:mergeinfo
- /branches/v0_91_maint/doc/sphinxext/only_directives.py:5753-5771
/branches/v0_98_5_maint/lib/matplotlib/sphinxext/only_directives.py:6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080,7176,7209-7211,7227,7245
/branches/v0_99_maint/lib/matplotlib/sphinxext/only_directives.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/lib/matplotlib/sphinxext/only_directives.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677
+ /branches/v0_91_maint/doc/sphinxext/only_directives.py:5753-5771
/branches/v0_98_5_maint/lib/matplotlib/sphinxext/only_directives.py:6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080,7176,7209-7211,7227,7245
/branches/v0_99_maint/lib/matplotlib/sphinxext/only_directives.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/lib/matplotlib/sphinxext/only_directives.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677,8679
Property changes on: trunk/matplotlib/lib/matplotlib/sphinxext/plot_directive.py
___________________________________________________________________
Modified: svn:mergeinfo
- /branches/v0_91_maint/doc/sphinxext/plot_directive.py:5753-5771
/branches/v0_98_5_maint/lib/matplotlib/sphinxext/plot_directive.py:6920-6925,6934,6941,6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080,7176,7209-7211,7227,7245
/branches/v0_99_maint/lib/matplotlib/sphinxext/plot_directive.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/lib/matplotlib/sphinxext/plot_directive.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677
+ /branches/v0_91_maint/doc/sphinxext/plot_directive.py:5753-5771
/branches/v0_98_5_maint/lib/matplotlib/sphinxext/plot_directive.py:6920-6925,6934,6941,6946,6948,6950,6952,6960,6972,6984-6985,6990,6995,6997-7001,7014,7016,7018,7024-7025,7033,7035,7042,7072,7080,7176,7209-7211,7227,7245
/branches/v0_99_maint/lib/matplotlib/sphinxext/plot_directive.py:7323-7338,7393,7395-7404,7407-7424,7428-7433,7442-7444,7446,7475-7482,7484,7486,7489-7523,7567,7569,7582-7584,7616-7618,7633,7638,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
/branches/v1_0_maint/lib/matplotlib/sphinxext/plot_directive.py:8521,8524-8541,8543,8549,8554,8557,8559-8564,8566,8573,8575,8577,8579,8581,8583,8585,8588,8590,8593,8595,8601,8603,8610,8614,8627-8628,8630,8632,8643,8645,8647-8667,8673,8675,8677,8679
Property changes on:
trunk/matplotlib/lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.png
___________________________________________________________________
Modified: svn:mergeinfo
-
/branches/v0_99_maint/lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.png:7323-7337,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
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+
/branches/v0_99_maint/lib/matplotlib/tests/baseline_images/test_spines/spines_axes_positions.png:7323-7337,7703,7727-7734,7740-7741,7745,7751,7756,7762,7770,7772,7774,7776-7778,7780,7784,7788,7790,7792,7794,7796,7800,7803,7808,7822,7827,7834,7837,7844,7846-7847,7849,7858,7864,7866-7867,7874,7884,7896,7901-7903,7916,7919,7924,7928,7944,7952,7970,7972,7981,7983,7989-7991,7998,8001,8003,8016-8057,8068,8070,8092-8116,8121-8135
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