On 4/3/12 3:09 AM, David Craig wrote:
> Hi again,
> So I removed everything and started again ( with version 1-0-2 :) )
> but am still having trouble, GEOS_DIR seems to be set correctly but I
> get the following error when trying to make the GEOS library with,
>
> sudo make; make install
>
> make[3]: Entering directory `/home/davcra/basemap-1.0.2/geos-3.3.1/src'
> test -z "/home/davcra/lib" || /bin/mkdir -p "/home/davcra/lib"
> /bin/sh ../libtool --mode=install /usr/bin/install -c libgeos.la
> '/home/davcra/lib'
> libtool: install: /usr/bin/install -c .libs/libgeos-3.3.1.so
> /home/davcra/lib/libgeos-3.3.1.so
> libtool: install: (cd /home/davcra/lib&& { ln -s -f libgeos-3.3.1.so
> libgeos.so || { rm -f libgeos.so&& ln -s libgeos-3.3.1.so libgeos.so;
> }; })
> libtool: install: /usr/bin/install -c .libs/libgeos.lai
> /home/davcra/lib/libgeos.la
> libtool: install: /usr/bin/install -c .libs/libgeos.a
> /home/davcra/lib/libgeos.a
> libtool: install: chmod 644 /home/davcra/lib/libgeos.a
> libtool: install: ranlib /home/davcra/lib/libgeos.a
> libtool: finish:
> PATH="/usr/ncl_files/bin:/usr/ncl_files/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/davcra/.local/bin:/home/davcra/bin:/sbin"
> ldconfig -n /home/davcra/lib
> ----------------------------------------------------------------------
> Libraries have been installed in:
> /home/davcra/lib
>
> If you ever happen to want to link against installed libraries
> in a given directory, LIBDIR, you must either use libtool, and
> specify the full pathname of the library, or use the `-LLIBDIR'
> flag during linking and do at least one of the following:
> - add LIBDIR to the `LD_LIBRARY_PATH' environment variable
> during execution
> - add LIBDIR to the `LD_RUN_PATH' environment variable
> during linking
> - use the `-Wl,-rpath -Wl,LIBDIR' linker flag
> - have your system administrator add LIBDIR to `/etc/ld.so.conf'
>
> See any operating system documentation about shared libraries for
> more information, such as the ld(1) and ld.so(8) manual pages.
> ----------------------------------------------------------------------
> make[3]: Nothing to be done for `install-data-am'.
> make[3]: Leaving directory `/home/davcra/basemap-1.0.2/geos-3.3.1/src'
> make[2]: Leaving directory `/home/davcra/basemap-1.0.2/geos-3.3.1/src'
> make[1]: Leaving directory `/home/davcra/basemap-1.0.2/geos-3.3.1/src'
> Making install in capi
> make[1]: Entering directory `/home/davcra/basemap-1.0.2/geos-3.3.1/capi'
> make[2]: Entering directory `/home/davcra/basemap-1.0.2/geos-3.3.1/capi'
> test -z "/home/davcra/lib" || /bin/mkdir -p "/home/davcra/lib"
> /bin/sh ../libtool --mode=install /usr/bin/install -c
> libgeos_c.la '/home/davcra/lib'
> libtool: install: warning: relinking `libgeos_c.la'
> libtool: install: (cd /home/davcra/basemap-1.0.2/geos-3.3.1/capi;
> /bin/sh /home/davcra/basemap-1.0.2/geos-3.3.1/libtool --tag CXX
> --mode=relink g++ -DGEOS_INLINE -pedantic -Wall -ansi -Wno-long-long
> -ffloat-store -g -O2 -version-info 8:1:7 -no-undefined -o libgeos_c.la
> -rpath /home/davcra/lib libgeos_c_la-geos_c.lo
> libgeos_c_la-geos_ts_c.lo ../src/libgeos.la )
> mv: cannot move `libgeos_c.so.1.7.1' to `libgeos_c.so.1.7.1U': Permission
> denied
> libtool: install: error: relink `libgeos_c.la' with the above command
> before installing it
> make[2]: *** [install-libLTLIBRARIES] Error 1
> make[2]: Leaving directory `/home/davcra/basemap-1.0.2/geos-3.3.1/capi'
> make[1]: *** [install-am] Error 2
> make[1]: Leaving directory `/home/davcra/basemap-1.0.2/geos-3.3.1/capi'
> make: *** [install-recursive] Error 1
>
> any ideas??
> thanks
> D
David: Seems like a permissions problem?
Any reason you're not using the libgeos yum package?
-Jeff
>
> On 3/31/12 5:48 AM, David Craig wrote:
>> Hi, I previously installed basemap by using the yum command. This
>> installed version 0.99.4. I want to install the latest version so I
>> can use shaded relief etc. This may be more of a linux problem but as
>> I am more familiar with python than linux I thought someone here may
>> be able to help.
>> Following the website instructions
>> (http://matplotlib.github.com/basemap/users/installing.html) I
>> downloaded the latest version and untarred it. Then in the basemap
>> directory (which contains geos-3.2.0) I try to set the environment
>> variable GEOS_DIR to point to the location of libgeos_c and geos_c.h.
>> I use the find command to locate the files,
>> /find / -name geos_c.h/ returns the location of that file as
>> //usr/lib/basemap-1.0.1/geos-3.2.0/capi/geos_c.h/
>> and
>> /find / -name libgeos*/
>> returns
>> //libgeos_c_la-geos_c.Plo
>> /usr/lib/libgeos-3.3.1.so<http://libgeos-3.3.1.so>
>> /usr/lib/libgeos_c.so.1.7.1
>> /usr/lib/libgeos_c.so.1/
>> so I set GEOS_DIR to /usr/lib (not sure if this is correct).
>> I then cd to the basemap directory and run,
>> python setup.py install
>> [davcra@... basemap-1.0.1]$ sudo python setup.py install
>> [sudo] password for davcra:
>> checking for GEOS lib in /root ....
>> checking for GEOS lib in /usr ....
>> checking for GEOS lib in /usr/local ....
>> checking for GEOS lib in /sw ....
>> checking for GEOS lib in /opt ....
>> checking for GEOS lib in /opt/local ....
>>
>> Can't find geos library . Please set the
>> environment variable GEOS_DIR to point to the location
>> where geos is installed (for example, if geos_c.h
>> is in /usr/local/include, and libgeos_c is in /usr/local/lib,
>> set GEOS_DIR to /usr/local), or edit the setup.py script
>> manually and set the variable GEOS_dir (right after the line
>> that says "set GEOS_dir manually here".
>> The problem seems to be with GEOS_DIR but I am not sure what I should
>> set it to.
>> Thanks
>> D
> David:
>
> The basemap setup.py is assuming that the geos library is installed in
> <GEOS_DIR>/lib, and geos_c.h in<GEOS_DIR>/include. You should set
> GEOS_DIR to the directory you specified with --prefix when you ran
> configure for geos 3.2.0 (I think the default is /usr/local). However,
> it looks like you have a redhat installed geos library in /usr/lib
> (seems like it is version 3.3.1). You probably could just install the
> -dev package (which would put the include file in /usr/include), and
> the basemap setup.py would autodetect it.
>
> Also, the latest version of basemap is 1.0.2, not 1.0.1.
>
> -Jeff
>
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