On 9/19/12 11:30 AM, Michael Rawlins wrote:
Ubuntu 12.04
hdf5-tools installed from package manager
netcdf-bin and python-netcdf installed from package manager
I downloaded netCDF4-1.0fix1.tar.gz
<http://code.google.com/p/netcdf4-python/downloads/detail?name=netCDF4-1.0fix1.tar.gz&can=2&q=>
from http://code.google.com/p/netcdf4-python/downloads/list
> python setup.py build
/usr/bin/ld: cannot find -lhdf5_hl
/usr/bin/ld: cannot find -lhdf5
collect2: ld returned 1 exit status
/usr/bin/ld: cannot find -lhdf5_hl
/usr/bin/ld: cannot find -lhdf5
collect2: ld returned 1 exit status
error: Command "gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions
-Wl,-Bsymbolic-functions -Wl,-z,relro
build/temp.linux-i686-2.7/netCDF4.o -L/usr/local/lib -L/usr/local/lib
-Wl,-R/usr/local/lib -Wl,-R/usr/local/lib -lnetcdf -lhdf5_hl -lhdf5
-lz -o build/lib.linux-i686-2.7/netCDF4.so" failed with exit status 1
Michael: You're missing the hdf5 library. You should be able to
install that (along with the netcdf version 4 library) using the Ubuntu
package manager. I don't know what the relevant package names are.
See the docs at netcdf4-python.googlecode.com for installation
instructions (including how to install the dependencies).
You can also file a help request there and I'll see it (since this is
not really a basemap issue).
-Jeff
--
Jeffrey S. Whitaker Phone : (303)497-6313
Meteorologist FAX : (303)497-6449
NOAA/OAR/PSD R/PSD1 Email : jeffrey.s.whita...@noaa.gov
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