Hi mauve-users Mauve doesn't seem to much like aligning scaffolds from 454 assemblies (where contigs are joined by long runs of Ns). It complains that the sequence has gaps or is already aligned.
Can it be made to play ball? I'd much rather use scaffolding information where available than reordering contigs. Cheers Nick ------------------------------------------------------------------------------ Special Offer-- Download ArcSight Logger for FREE (a $49 USD value)! Finally, a world-class log management solution at an even better price-free! Download using promo code Free_Logger_4_Dev2Dev. Offer expires February 28th, so secure your free ArcSight Logger TODAY! http://p.sf.net/sfu/arcsight-sfd2d _______________________________________________ Mauve-users mailing list Mauve-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mauve-users
