Dear all,
I am interested about using mauvealigner to reordering the contig using a
reference genome.
However, when I try to use it on terminal by a unix server, like this:
java -Xmx500m -cp Mauve.jar org.gel.mauve.contigs.ContigOrderer -output
results_dir -ref test/chloroplast-eA.fasta -draft test/choloroplast-dnA.fasta
however, an error like this:
No X11 DISPLAY variable was set
Can I just run Mauve on terminal?
Can anyone help me fix this error?
Thanks!
Jingjing
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