Hello,
I am trying to align 26 *Staphylococcus aureus *samples in Mauve
Contig Mover .the program gets terminated at 99%. How to resolve it?
Running alignment.
Executing
win64\progressiveMauve
--output=G:\MRSA _FASTA sequence- Backup\FASTA format\output\Mauve Output
--output-guide-tree=G:\MRSA _FASTA sequence- Backup\FASTA
format\output\Mauve Output.guide_tree
--backbone-output=G:\MRSA _FASTA sequence- Backup\FASTA format\output\Mauve
Output.backbone
G:\MRSA _FASTA sequence- Backup\FASTA format\Reference sequence.fasta
G:\MRSA _FASTA sequence- Backup\FASTA format\AB123.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070033.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070034.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070036.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070038.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070039.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070040.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070042.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070043.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070044.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070045.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070046.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070047.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070048.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR072246.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR072247.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR108054.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124429.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124430.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124431.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124432.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124434.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124435.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR128707.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR128708.FASTA
G:\MRSA _FASTA sequence- Backup\FASTA format\P491.FASTA
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw16.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\Reference sequence.fasta 2832299
base pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw3CE.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\AB123.FASTA 52796191 base pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw610.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070033.FASTA 49490631 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw153E.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070034.FASTA 224122532 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw1C8F.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070036.FASTA 167243649 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw33E7.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070038.FASTA 298591521 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw40F2.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070039.FASTA 179705541 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw4769.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070040.FASTA 153650037 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw4DFF.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070042.FASTA 172496060 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw54D3.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070043.FASTA 142937109 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw5ADC.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070044.FASTA 190276981 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw5F31.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070045.FASTA 74765762 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw6357.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070046.FASTA 113657706 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw6A5A.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070047.FASTA 75720377 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw710F.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR070048.FASTA 77831815 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw7BE8.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR072246.FASTA 122657332 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw880A.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR072247.FASTA 142747300 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw8CAD.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR108054.FASTA 103669643 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw947A.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124429.FASTA 203992030 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\raw9D80.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124430.FASTA 187782356 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\rawA52F.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124431.FASTA 133172644 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\rawAFDA.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124432.FASTA 122620540 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\rawBAF2.tmp
Sequence loaded successfully.
G:\MRSA _FASTA sequence- Backup\FASTA format\ERR124434.FASTA 149956887 base
pairs.
Storing raw sequence at C:\Users\user\AppData\Local\Temp\rawD8DF.tmp
------------------------------------------------------------------------------
_______________________________________________
Mauve-users mailing list
Mauve-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/mauve-users
