Hi everyone,what must I do to solved this mauve error problem.
trying path /home/bioifworkstation1/Desktop/mauve_snapshot_2015-
02-13/linux-x64/progressiveMauve
Running alignment.
Executing
/home/bioifworkstation1/Desktop/mauve_snapshot_2015-02-13/linux-x64/
progressiveMauve
--output=/media/bioifworkstation1/Bioinf2drive/Mauve/NewMauve1/
Mauvetest1
--output-guide-tree=/media/bioifworkstation1/
Bioinf2drive/Mauve/NewMauve1/Mauvetest1.guide_tree
--backbone-output=/media/bioifworkstation1/Bioinf2drive/Mauve/NewMauve1/
Mauvetest1.backbone
/home/bioifworkstation1/Desktop/HR_fasta
/home/bioifworkstation1/Desktop/WR_fasta
/home/bioifworkstation1/Desktop/BR_fasta
Storing raw sequence at /tmp/rawseq10955.000
Sequence loaded successfully.
/home/bioifworkstation1/Desktop/HR_fasta 2366941834 <(236)%20694-1834> base
pairs.
Storing raw sequence at /tmp/rawseq10955.001
Sequence loaded successfully.
/home/bioifworkstation1/Desktop/WR_fasta 2464350348 <(246)%20435-0348> base
pairs.
Storing raw sequence at /tmp/rawseq10955.002
Sequence loaded successfully.
/home/bioifworkstation1/Desktop/BR_fasta 2331675994 base pairs.
Using weight 21 mers for initial seeds
Creating sorted mer list
Create time was: 4762 seconds.
Creating sorted mer list
Create time was: 5723 seconds.
Creating sorted mer list
Create time was: 4674 seconds.
0%..2%..3%..4%..5%..6%..7%..8%..9%..10%..
11%..12%..13%..14%..15%..16%..17%..18%..19%..20%..
21%..22%..23%..24%..25%..26%..27%..28%..29%..30%..
31%..32%..33%..34%..35%..36%..37%..38%..39%..40%..
41%..42%..43%..44%..45%..46%..47%..48%..49%..50%..
51%..52%..53%..54%..55%..56%..57%..58%..59%..60%..
61%..62%..63%..64%..65%..66%..67%..68%..69%..70%..
71%..72%..73%..74%..75%..76%..77%..78%..79%..80%..
81%..82%..83%..84%..85%..86%..87%..88%..89%..90%..
91%..92%..93%..94%..95%..96%..97%..98%..99%..100%..
done.
using default bp penalty: 218071
using default bp estimate min score: 654212
Starting with 92379629 multi-matches
Computing genome content distance matrix...
Genome conservation distance matrix:
0 0.677953 0.682706
0.677953 0 0.152984
0.682706 0.152984 0
Writing guide tree to /media/bioifworkstation1/Bioinf2drive/Mauve/NewMauve1/
Mauvetest1.guide_tree
reading tree...
initializing alignment tree...
Constructing seed occurrence lists for repeat detection
Calculating pairwise breakpoint distances
Pair 0, 1 has 23118547 initial LCBs
Using scaled bp penalty: 7037.1
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Exited with error code: 134
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