The first scenario has something to do with an incorrect lapack install,
or perhaps you just need to specify --with-lapack when running
configure.
I'm not familiar with the other errors.
On Mon, 2 Apr 2007, Nicolas Tetreault wrote:
Hi all,
hopefully you can give me a hand with this. I can't compile harminv. I
get errors during the compilation. Depending on the compiler used I
either get:
CC=gcc and F77=f77 or ifort
gcc -g -O2 -o harminv
harminv-main.o
/usr/local/Cluster-Apps/intel/mkl/9.0.018/lib/em64t/libmkl_lapack32.so
/usr/local/Cluster-Apps/intel/mkl/9.0.018/lib/em64t/libmkl.so
-L/home/nt271/comp-apps/para/lib ./.libs/libharminv.a
-L/usr/lib/gcc/x86_64-redhat-linux/3.4.5
-L/usr/lib/gcc/x86_64-redhat-linux/3.4.5/../../../../lib64
-L/usr/lib/gcc/x86_64-redhat-linux/3.4.5/../../.. -L/lib/../lib64
-L/usr/lib/../lib64 -lfrtbegin -lg2c -lm -lgcc_s
./.libs/libharminv.a(harminv.o)(.text+0x2114): In function
`solve_eigenvects':
/home/nt271/temp/harminv-1.3.1/harminv.c:497: undefined reference to
`zgeev_'
collect2: ld returned 1 exit status
make[1]: *** [harminv] Error 1
make[1]: Leaving directory `/home/nt271/temp/harminv-1.3.1'
make: *** [all] Error 2
When using CC=mpicc with F77=mpif77 or ifort or f77
I get:
mpicc -DHAVE_CONFIG_H -I. -I. -I. -I/home/nt271/comp-apps/para/include
-g -O2 -MT harminv.lo -MD -MP -MF .deps/harminv.Tpo -c harminv.c -o
harminv.o
-DHAVE_CONFIG_H -I. -I. -I. -I/home/nt271/comp-apps/para/include -g -O2
-MT harminv.lo -MD -MP -MF .deps/harminv.Tpo -c harminv.c -o harminv.o
-I/usr/local/Cluster-Apps/infinipath/2.0/if-mpi/include/
/bin/sh ./libtool --tag=CC --mode=link mpicc -g -O2
-L/home/nt271/comp-apps/para/lib -o libharminv.la -rpath /usr/local/lib
-version-info 2:4:0
harminv.lo
/usr/local/Cluster-Apps/intel/mkl/9.0.018/lib/em64t/libmkl_lapack32.so
/usr/local/Cluster-Apps/intel/mkl/9.0.018/lib/em64t/libmkl.so -lm
-L/home/nt271/comp-apps/para/lib -L/usr/lib/gcc/x86_64-redhat-linux/3.4.5
-L/usr/lib/gcc/x86_64-redhat-linux/3.4.5/../../../../lib64
-L/usr/lib/gcc/x86_64-redhat-linux/3.4.5/../../.. -L/lib/../lib64
-L/usr/lib/../lib64 -lfrtbegin -lg2c -lm -lgcc_s
rm -fr .libs/libharminv.a .libs/libharminv.la .libs/libharminv.lai
ar cru .libs/libharminv.a harminv.o
ranlib .libs/libharminv.a
creating libharminv.la
(cd .libs && rm -f libharminv.la && ln -s ../libharminv.la
libharminv.la)
if mpicc -DHAVE_CONFIG_H -I. -I. -I.
-I/home/nt271/comp-apps/para/include -g -O2 -MT harminv-main.o -MD -MP
-MF ".deps/harminv-main.Tpo" -c -o harminv-main.o harminv-main.c; \
then mv -f ".deps/harminv-main.Tpo" ".deps/harminv-main.Po"; else rm -f
".deps/harminv-main.Tpo"; exit 1; fi
-DHAVE_CONFIG_H -I. -I. -I. -I/home/nt271/comp-apps/para/include -g -O2
-MT harminv-main.o -MD -MP -MF .deps/harminv-main.Tpo -c -o
harminv-main.o harminv-main.c
-I/usr/local/Cluster-Apps/infinipath/2.0/if-mpi/include/
harminv-main.c(126): error: floating-point operation result is out of
range
const double inf = 1.0 / 0.0;
^
harminv-main.c(158): warning #181: argument is incompatible with
corresponding format string conversion
DENSITY,
^
compilation aborted for harminv-main.c (code 2)
make[1]: *** [harminv-main.o] Error 1
make[1]: Leaving directory `/home/nt271/temp/harminv-1.3.1'
make: *** [all] Error 2
using CC=mpixx or CC=mpiCC stop the configure script with this error:
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for C complex keyword... __complex__
checking for C complex I constant... unsupported
configure: error: C doesn't support complex numbers.
Here are the different compilers:
gcc --version
gcc (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2)
f77 --version
GNU Fortran (GCC) 3.4.5 20051201 (Red Hat 3.4.5-2)
mpicc --version
--version -I/usr/local/Cluster-Apps/infinipath/2.0/if-mpi/include/
icc (ICC) 9.1 20060818
Copyright (C) 1985-2006 Intel Corporation. All rights reserved.
ifort --version
ifort (IFORT) 9.1 20060818
Copyright (C) 1985-2006 Intel Corporation. All rights reserved.
Any help highly appreciated!
Nic
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