Nicolas Tetreault <[EMAIL PROTECTED]> writes: > > Hi all, > I figured out the lapack compile problems finally. Now everything > compiles fine, and runs well... except I never get any output from > harminv. > > For example, if I run the ring example from the tutorial on the super > computer either with meep, meep-mpi (with mpirun) or meep (with mpirun > -nonmpi), I get this output: > > ----------- > Initializing structure... > Working in 2D dimensions. > cylinder, center = (0,0,0) > radius 2, height 1e+20, axis (0, 0, 1) > dielectric constant epsilon = 11.56 > cylinder, center = (0,0,0) > radius 1, height 1e+20, axis (0, 0, 1) > dielectric constant epsilon = 1 > time for set_epsilon = 0.058553 s > ----------- > creating output file "./ring-eps-000000.00.h5"... > harminv0:, frequency, imag. freq., Q, |amp|, amplitude, error > run 0 finished at t = 300.0 (6000 timesteps) > > Elapsed run time = 2.35695 s
It turns out that I had to compile meep itself with g++ instead of icpc. For others having this problem on a cluster setup to use intel compilers, you can use CC="mpiCC -CC=gcc" for harminv and CXX="mpiCC -CC=g++" for meep. Also, for the configuration script to find the mpi libraries, I had to run it like this: ./configure ac_cv_prog_MPICXX="mpiCC -CC=g++" CXX="mpiCC -CC=g++" --with-mpi Also, for some reason I would get errors on because of -DVERSION with spaces, e.g. "meep 0.10", i had to go in the Makefile and change them to meep_0.10 for example. Hopefully that's the last of my problem! Nic _______________________________________________ meep-discuss mailing list [email protected] http://ab-initio.mit.edu/cgi-bin/mailman/listinfo/meep-discuss
