Hello, I'm trying to identify orthologous skipped exons between a human (hg19; ~600 events of interest total) dataset and a mouse (mm10) dataset. Has anyone had luck with "lifting over" the MISO coordinates for these events. I've tried the following:
1) Searching through Biomart to find exon orthologue table (can't seem to find one) 2) Using blat to match the human sequence of skipped exons to a database of sequences built from the mm10 dataset I'll keep working on this and will post if I find a solution, but wanted to see if anyone has had any luck with this! Thanks so much! James
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