Hi guys,

I wanted to hear your opinion regarding two possible ways of reducing
memory requirements in handling segmentations in MITK.

So far, a separate binary image is used to handle each segmentation,
right?. This in principle means a lot of memory waste, as each
segmentation has to have the same size as the reference image (also in
RAM). The pixel size is 8bits, but still, a lot of memory. The option
of cropping the segmentation (e.g. by the AutoCrop filter) to a
reduced size is always present; but this is not optimal as the user
may want to continue segmenting in other regions in a new work
session.

A way of reducing this memory burden could be to use 1-bit binary
images: http://insight-journal.org/browse/publication/646. Do you
think it's feasible to adapt mitkImage to cope with
itkSingleBitBinaryImage?

Another solution would be to have all segmentations into a single
labeled image (like e.g. in Amira). The classes contributed to ITK in
http://insight-journal.org/browse/publication/176 look very promising
to this aim. What do you think?

Do you see other approaches?

thanks for the great job
sebastian

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