The best thing would be to find out why /opt/local/include is in the list of include directories. MITK or CMake does not set it... (as far as I know).
Best, Sascha On 12/14/2011 09:34 PM, David Marshall wrote: > I do have a CppUnit sub-directory in /opt/local/include. > > I have installed numerous software via macports, of which that cppunit is > one. Following up the chain of dependencies a few levels... I see that Gimp2 > is dependant on it. Will I need to uninstall this version of cppunit and > anything that depends on it in order to be able to compile MITK? > > Regards, > David Marshall > > On 14/12/2011, at 9:17 AM, Sascha Zelzer wrote: > >> Hi David, >> >> according to the posted output of "c++ -v", you are using the gcc front-end >> for LLVM. I don't know if that "should" work on Mac with MITK. Our Mac guys >> should be able to tell you if using LLVM with XCode works. >> >> AFAIK, people usually use the "classic" gcc on Mac. >> >> You should also verify that you *don't* have a CppUnit sub-directory in >> /opt/local/include >> >> - Sascha >> >> On 12/14/2011 03:51 AM, David Marshall wrote: >>> Sascha, >>> >>> Thanks for your help on this. Here is that output. >>> >>> David >>> >>> David-Marshalls-MacBook-Air:MITK-superbuild davidmarshall$ /usr/bin/c++ -v >>> Using built-in specs. >>> Target: i686-apple-darwin11 >>> Configured with: >>> /private/var/tmp/llvmgcc42/llvmgcc42-2336.1~1/src/configure >>> --disable-checking --enable-werror --prefix=/Developer/usr/llvm-gcc-4.2 >>> --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ >>> --program-prefix=llvm- --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ >>> --with-slibdir=/usr/lib --build=i686-apple-darwin11 >>> --enable-llvm=/private/var/tmp/llvmgcc42/llvmgcc42-2336.1~1/dst-llvmCore/Developer/usr/local >>> --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 >>> --target=i686-apple-darwin11 --with-gxx-include-dir=/usr/include/c++/4.2.1 >>> Thread model: posix >>> gcc version 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.1.00) >>> >>> David-Marshalls-MacBook-Air:mitk-build davidmarshall$ make VERBOSE=1 >>> org_blueberry_test >>> /opt/local/bin/cmake -H/Users/davidmarshall/MITK >>> -B/Users/davidmarshall/MITK-superbuild/MITK-build --check-build-system >>> CMakeFiles/Makefile.cmake 0 >>> make -f CMakeFiles/Makefile2 org_blueberry_test >>> /opt/local/bin/cmake -H/Users/davidmarshall/MITK >>> -B/Users/davidmarshall/MITK-superbuild/MITK-build --check-build-system >>> CMakeFiles/Makefile.cmake 0 >>> /opt/local/bin/cmake -E cmake_progress_start >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles 13 >>> make -f CMakeFiles/Makefile2 >>> BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/all >>> make -f Utilities/Poco/Foundation/CMakeFiles/PocoFoundation.dir/build.make >>> Utilities/Poco/Foundation/CMakeFiles/PocoFoundation.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/Utilities/Poco/Foundation >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/Foundation >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/Foundation/CMakeFiles/PocoFoundation.dir/DependInfo.cmake >>> --color= >>> make -f Utilities/Poco/Foundation/CMakeFiles/PocoFoundation.dir/build.make >>> Utilities/Poco/Foundation/CMakeFiles/PocoFoundation.dir/build >>> make[3]: Nothing to be done for >>> `Utilities/Poco/Foundation/CMakeFiles/PocoFoundation.dir/build'. >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles 34 35 36 37 38 >>> 39 40 >>> [ 53%] Built target PocoFoundation >>> make -f Utilities/Poco/XML/CMakeFiles/PocoXML.dir/build.make >>> Utilities/Poco/XML/CMakeFiles/PocoXML.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/Utilities/Poco/XML >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/XML >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/XML/CMakeFiles/PocoXML.dir/DependInfo.cmake >>> --color= >>> make -f Utilities/Poco/XML/CMakeFiles/PocoXML.dir/build.make >>> Utilities/Poco/XML/CMakeFiles/PocoXML.dir/build >>> make[3]: Nothing to be done for >>> `Utilities/Poco/XML/CMakeFiles/PocoXML.dir/build'. >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles 42 43 >>> [ 69%] Built target PocoXML >>> make -f Utilities/Poco/Util/CMakeFiles/PocoUtil.dir/build.make >>> Utilities/Poco/Util/CMakeFiles/PocoUtil.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/Utilities/Poco/Util >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/Util >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/Util/CMakeFiles/PocoUtil.dir/DependInfo.cmake >>> --color= >>> make -f Utilities/Poco/Util/CMakeFiles/PocoUtil.dir/build.make >>> Utilities/Poco/Util/CMakeFiles/PocoUtil.dir/build >>> make[3]: Nothing to be done for >>> `Utilities/Poco/Util/CMakeFiles/PocoUtil.dir/build'. >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles 41 >>> [ 76%] Built target PocoUtil >>> make -f Utilities/mbilog/CMakeFiles/mbilog.dir/build.make >>> Utilities/mbilog/CMakeFiles/mbilog.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/Utilities/mbilog >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/mbilog >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/mbilog/CMakeFiles/mbilog.dir/DependInfo.cmake >>> --color= >>> make -f Utilities/mbilog/CMakeFiles/mbilog.dir/build.make >>> Utilities/mbilog/CMakeFiles/mbilog.dir/build >>> make[3]: Nothing to be done for >>> `Utilities/mbilog/CMakeFiles/mbilog.dir/build'. >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles >>> [ 76%] Built target mbilog >>> make -f >>> BlueBerry/Bundles/org.blueberry.osgi/CMakeFiles/org_blueberry_osgi.dir/build.make >>> >>> BlueBerry/Bundles/org.blueberry.osgi/CMakeFiles/org_blueberry_osgi.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.osgi >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.osgi >>> >>> /Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.osgi/CMakeFiles/org_blueberry_osgi.dir/DependInfo.cmake >>> --color= >>> make -f >>> BlueBerry/Bundles/org.blueberry.osgi/CMakeFiles/org_blueberry_osgi.dir/build.make >>> >>> BlueBerry/Bundles/org.blueberry.osgi/CMakeFiles/org_blueberry_osgi.dir/build >>> make[3]: Nothing to be done for >>> `BlueBerry/Bundles/org.blueberry.osgi/CMakeFiles/org_blueberry_osgi.dir/build'. >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles 70 71 >>> [ 92%] Built target org_blueberry_osgi >>> make -f Utilities/Poco/CppUnit/CMakeFiles/CppUnit.dir/build.make >>> Utilities/Poco/CppUnit/CMakeFiles/CppUnit.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/Utilities/Poco/CppUnit >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/CppUnit >>> /Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/Poco/CppUnit/CMakeFiles/CppUnit.dir/DependInfo.cmake >>> --color= >>> make -f Utilities/Poco/CppUnit/CMakeFiles/CppUnit.dir/build.make >>> Utilities/Poco/CppUnit/CMakeFiles/CppUnit.dir/build >>> make[3]: Nothing to be done for >>> `Utilities/Poco/CppUnit/CMakeFiles/CppUnit.dir/build'. >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles >>> [ 92%] Built target CppUnit >>> make -f >>> BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/build.make >>> >>> BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/depend >>> cd /Users/davidmarshall/MITK-superbuild/MITK-build&& /opt/local/bin/cmake >>> -E cmake_depends "Unix Makefiles" /Users/davidmarshall/MITK >>> /Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test >>> /Users/davidmarshall/MITK-superbuild/MITK-build >>> /Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.test >>> >>> /Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/DependInfo.cmake >>> --color= >>> make -f >>> BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/build.make >>> >>> BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/build >>> /opt/local/bin/cmake -E cmake_progress_report >>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeFiles >>> [ 92%] Building CXX object >>> BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/src/berryBlueBerryTestDriver.cpp.o >>> cd >>> /Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.test&& >>> /usr/bin/c++ -Dorg_blueberry_test_EXPORTS -DQT_GUI_LIB -DQT_CORE_LIB >>> -DQT_GUI_LIB -DQT_CORE_LIB -DQT_DEBUG -DQT_DEBUG -DLINUX_EXTRA -g -fPIC >>> -I/Users/davidmarshall/MITK/Utilities/mbilog >>> -I/Users/davidmarshall/MITK-superbuild/MITK-build/Utilities/mbilog >>> -I/opt/local/include -I/opt/local/include/QtGui -I/opt/local/include/QtCore >>> -I/Users/davidmarshall/MITK/Utilities/Poco/CppUnit/include >>> -I/Users/davidmarshall/MITK/Utilities/Poco/Foundation/include >>> -I/Users/davidmarshall/MITK/Utilities/Poco/Net/include >>> -I/Users/davidmarshall/MITK/Utilities/Poco/Util/include >>> -I/Users/davidmarshall/MITK/Utilities/Poco/XML/include >>> -I/Users/davidmarshall/MITK/Utilities/Poco/Zip/include >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test/src >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test/src/harness >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test >>> -I/Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.test >>> -I/Users/davidmarshall/MITK-superbuild/CTK-build/CTK-build >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.osgi/src >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.osgi/src/application >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.osgi/src/event >>> -I/Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.osgi/src/service >>> >>> -I/Users/davidmarshall/MITK-superbuild/MITK-build/BlueBerry/Bundles/org.blueberry.osgi >>> >>> -I/Users/davidmarshall/MITK-superbuild/CMakeExternals/Source/CTK/Libs/PluginFramework >>> >>> -I/Users/davidmarshall/MITK-superbuild/CTK-build/CTK-build/Libs/PluginFramework >>> -I/Users/davidmarshall/MITK-superbuild/CMakeExternals/Source/CTK/Libs/Core >>> -I/Users/davidmarshall/MITK-superbuild/CTK-build/CTK-build/Libs/Core >>> -DQT_PLUGIN -o >>> CMakeFiles/org_blueberry_test.dir/src/berryBlueBerryTestDriver.cpp.o -c >>> /Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test/src/berryBlueBerryTestDriver.cpp >>> /Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test/src/berryBlueBerryTestDriver.cpp: >>> In member function ‘int berry::BlueBerryTestDriver::Run()’: >>> /Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test/src/berryBlueBerryTestDriver.cpp:49: >>> error: no matching function for call to >>> ‘CppUnit::TestRunner::addTest(std::string, CppUnit::Test*&)’ >>> /opt/local/include/CppUnit/TestRunner.h:85: note: candidates are: virtual >>> void CppUnit::TestRunner::addTest(CppUnit::Test*) >>> /Users/davidmarshall/MITK/BlueBerry/Bundles/org.blueberry.test/src/berryBlueBerryTestDriver.cpp:70: >>> error: no matching function for call to >>> ‘CppUnit::TestRunner::run(std::vector<std::basic_string<char, >>> std::char_traits<char>, std::allocator<char> >, >>> std::allocator<std::basic_string<char, std::char_traits<char>, >>> std::allocator<char> > > >&)’ >>> /opt/local/include/CppUnit/TestRunner.h:95: note: candidates are: virtual >>> void CppUnit::TestRunner::run(CppUnit::TestResult&, const std::string&) >>> make[3]: *** >>> [BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/src/berryBlueBerryTestDriver.cpp.o] >>> Error 1 >>> make[2]: *** >>> [BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/all] >>> Error 2 >>> make[1]: *** >>> [BlueBerry/Bundles/org.blueberry.test/CMakeFiles/org_blueberry_test.dir/rule] >>> Error 2 >>> make: *** [org_blueberry_test] Error 2 >>> >>> On 13/12/2011, at 7:20 PM, Sascha Zelzer wrote: >>> >>>> Hi David, >>>> >>>> according to your CMake cache, your compiler is >>>> >>>> /usr/bin/c++ >>>> >>>> >>>> To make sure what it is, please post the output of "/usr/bin/c++ -v". >>>> >>>> Please also post the output of calling >>>> >>>> make VERBOSE=1 org_blueberry_test >>>> >>>> >>>> in your MITK-build directory. I am looking for strange include dirs which >>>> might point to another CppUnit installation on your system. >>>> >>>> Thanks, >>>> Sascha >>>> >>>> On 12/14/2011 12:43 AM, David Marshall wrote: >>>>> Sascha, >>>>> >>>>> I have assumed that gcc is my default compiler, given that I have >>>>> installed XCode... but is it possible that a different compiler is being >>>>> used? >>>>> >>>>> David >>>>> >>>>> On 13/12/2011, at 11:14 AM, David Marshall wrote: >>>>> >>>>>> Sascha, >>>>>> >>>>>> Here it is.<CMakeCache.txt> >>>>>> >>>>>> Thanks, >>>>>> David >>>>>> >>>>>> On 13/12/2011, at 10:09 AM, Sascha Zelzer wrote: >>>>>> >>>>>>> Hi David, >>>>>>> >>>>>>> thanks for the file. Could you please also your >>>>>>> >>>>>>> /Users/davidmarshall/MITK-superbuild/MITK-build/CMakeCache.txt >>>>>>> >>>>>>> file. >>>>>>> >>>>>>> Thanks, >>>>>>> Sascha >>>>>>> >>>>>>> On 12/12/2011 08:39 PM, David Marshall wrote: >>>>>>>> gcc version 4.2.1 >> ------------------------------------------------------------------------------ 10 Tips for Better Server Consolidation Server virtualization is being driven by many needs. But none more important than the need to reduce IT complexity while improving strategic productivity. Learn More! http://www.accelacomm.com/jaw/sdnl/114/51507609/ _______________________________________________ mitk-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/mitk-users
