Dear Iordanis, The dicom import has so far only been implemented for Siemens dicom images. MITK-DI is capable of reading the nrrd format, which is documented elsewhere [1, 2]. These files can be created by combining the raw image data with a corresponding textual header file. The file extension should be changed from *.nrrd to *.dwi or from *.nhdr to *.hdwi respectively in order to let MITK-DI recognize the diffusion related header information provided in the files.
Similar mechanism is available for the FSL Nifti format. The file extension should be changed from *.nii to *.fsl or from *.nii.gz to *.fslgz respectively in order to let MITK-DI recognize the diffusion related header information provided in the files. Best regards, Klaus [1] http://teem.sourceforge.net/nrrd/format.html [2] http://www.cmake.org/Wiki/Getting_Started_with_the_NRRD_Format -----Ursprüngliche Nachricht----- Von: Iordanis Evangelou [mailto:[email protected]] Gesendet: Dienstag, 12. November 2013 23:08 An: Maier-Hein, Klaus H. Betreff: MITK Diffusion Mr Iordanis Evangelou hat Ihnen eine Nachricht über Ihr Kontaktformular (http://www.dkfz.de/en/mbi/people/Klaus_Fritzsche.php) zukommen lassen. Salutation: Mr Last Name*: Evangelou First Name*: Iordanis Address: Zip Code: City: Country: Phone: Fax: E-mail*: [email protected] Subject*: MITK Diffusion Your Message*: i am using 2013.09.04 and it cannot read the DWI sequence from a GE scanner. gives the error #4.980# ERROR: Sorting tags (0x0020,0x0012) and (0x0018,0x0024) missing, ABORTING #4.980# ERROR: Nno files in acquisitions, ABORTING ------------------------------------------------------------------------------ DreamFactory - Open Source REST & JSON Services for HTML5 & Native Apps OAuth, Users, Roles, SQL, NoSQL, BLOB Storage and External API Access Free app hosting. Or install the open source package on any LAMP server. Sign up and see examples for AngularJS, jQuery, Sencha Touch and Native! http://pubads.g.doubleclick.net/gampad/clk?id=63469471&iu=/4140/ostg.clktrk _______________________________________________ mitk-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/mitk-users
