On 01/10/2014 04:50 PM, Félix C. Morency wrote: > Hi, > > IIRC, MITK has its own internal PARREC reader that doesn't support > PARREC v4.2. I think the reason for this is historical since ITK 3 > support for PAR/REC was limited (located in Review). Make sure to > disable this reader before writing your own or the two will conflict. > > HTH, > -F > You're right, I thought it was an internal class. @Ivo: can you shed some light on the history?
> > On Fri, Jan 10, 2014 at 10:16 AM, Marco Nolden > <[email protected] <mailto:[email protected]>> wrote: > > Hi Dieter, > > you probably do not even have to code much. In general, all ITK readers > are directly available in MITK through ITK's ImageIO. However, the > par/rec reader is not enabled by default in the ITK build. > > > If you look at your MITK superbuild directory, please look at the > "ITK-build" directory. You can run the CMake GUI there and change ITK's > build options. The defaults for building ITK are specified in the MITK > source at CMakeExternals/ITK.cmake > > Another caveat is the handling of file extensions in the workbench. At > the moment the list of supported extensions is kind of hard-coded (we > are working on that!), so it is possible that your files won't show up > in the File Open dialog. However you could still drag and drop them in > the workbench. > > Please let us know if it works! We could then extend the defaults for > our ITK build. > > Best, > > Marco > > > On 01/10/2014 03:36 PM, Goch, Caspar Jonas wrote: > > Hi Dieter, > > > > you do not have to change the core to add additional readers to > MITK (though if you want to contribute your reader once it is done, > we will be grateful). If you want to take a general look at how > readers in MITK work you can take a look at the core though [1]. As > an example of a Module implementing its own data type, factories, > readers and writers you can take a look at e.g. the DiffusionCore > module[2]. You can choose a similar setup and add the readers to > your own module in the awesome project. > > > > You will need to add at least the reader and a corresponding > factory to your module. > > > > Best > > Caspar > > > > [1] > > http://mitk.org/git/?p=MITK.git;a=tree;f=Core/Code/IO;h=c413d0d3291c7caf77e71325fb117738a881eb82;hb=HEAD > > [2] > > http://mitk.org/git/?p=MITK.git;a=tree;f=Modules/DiffusionImaging/DiffusionCore/IODataStructures;h=20b9fcf67f138f3cb5700ec68ab546e06e13ce21;hb=HEAD > > > > -----Ursprüngliche Nachricht----- > > Von: Dieter Menne [mailto:[email protected] > <mailto:[email protected]>] > > Gesendet: Donnerstag, 9. Januar 2014 17:37 > > An: [email protected] > <mailto:[email protected]> > > Betreff: [mitk-users] Add Philips par/rec import to workbench > > > > Hi, > > > > My background: I have used ITK and VTK before, but I am new to > MITK and a bit overwhelmed by it. Setup and building of > Awesomeproject works ok. > > > > As a first exercise, I am trying to add Philips par/rec to the > formats that can be read from the project generated from > https://github.com/MITK/MITK-ProjectTemplate. > > > > The source is from ITK are in ITK-src/Modules/IO/PhilipsRec. If I > understand the architecture drawing correctly, Import is part of the > core module. Does this mean that I have to change the core module to > use this import filter? > > > > Lost in MITK-space. Any hints where to look for a starter are > appreciated. > > > > Dieter Menne > > > > > > > > > > > > ------------------------------------------------------------------------------ > > CenturyLink Cloud: The Leader in Enterprise Cloud Services. > > Learn Why More Businesses Are Choosing CenturyLink Cloud For > Critical Workloads, Development Environments & Everything In Between. > > Get a Quote or Start a Free Trial Today. > > > > http://pubads.g.doubleclick.net/gampad/clk?id=119420431&iu=/4140/ostg.clktrk > > _______________________________________________ > > mitk-users mailing list > > [email protected] > <mailto:[email protected]> > > https://lists.sourceforge.net/lists/listinfo/mitk-users > > > > > > ------------------------------------------------------------------------------ > > CenturyLink Cloud: The Leader in Enterprise Cloud Services. > > Learn Why More Businesses Are Choosing CenturyLink Cloud For > > Critical Workloads, Development Environments & Everything In Between. > > Get a Quote or Start a Free Trial Today. > > > > http://pubads.g.doubleclick.net/gampad/clk?id=119420431&iu=/4140/ostg.clktrk > > _______________________________________________ > > mitk-users mailing list > > [email protected] > <mailto:[email protected]> > > https://lists.sourceforge.net/lists/listinfo/mitk-users > > > > > -- > ---------------------------------------------------------------------- > Dipl.-Inform. Med. Marco Nolden > Deutsches Krebsforschungszentrum (German Cancer Research Center) > Div. Medical & Biological Informatics Tel: (+49) 6221-42 > 2325 <tel:%28%2B49%29%206221-42%202325> > Im Neuenheimer Feld 280 Fax: (+49) 6221-42 > 2345 <tel:%28%2B49%29%206221-42%202345> > D-69120 Heidelberg eMail: > [email protected] <mailto:[email protected]> > > > ------------------------------------------------------------------------------ > CenturyLink Cloud: The Leader in Enterprise Cloud Services. > Learn Why More Businesses Are Choosing CenturyLink Cloud For > Critical Workloads, Development Environments & Everything In Between. > Get a Quote or Start a Free Trial Today. > > http://pubads.g.doubleclick.net/gampad/clk?id=119420431&iu=/4140/ostg.clktrk > _______________________________________________ > mitk-users mailing list > [email protected] > <mailto:[email protected]> > https://lists.sourceforge.net/lists/listinfo/mitk-users > > > > > -- > Félix C. Morency, M.Sc. > Plateforme d’analyse et de visualisation d’images > Centre Hospitalier Universitaire de Sherbrooke > Centre de recherche clinique Étienne-Le Bel > Local Z5-3031 | 819.346.1110 ext 16634 -- ---------------------------------------------------------------------- Dipl.-Inform. Med. Marco Nolden Deutsches Krebsforschungszentrum (German Cancer Research Center) Div. Medical & Biological Informatics Tel: (+49) 6221-42 2325 Im Neuenheimer Feld 280 Fax: (+49) 6221-42 2345 D-69120 Heidelberg eMail: [email protected] ------------------------------------------------------------------------------ CenturyLink Cloud: The Leader in Enterprise Cloud Services. Learn Why More Businesses Are Choosing CenturyLink Cloud For Critical Workloads, Development Environments & Everything In Between. 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