Thanks Luis. I’m trying to avoid system python, and to use the downloaded one.
Eric’s suggestion worked. Thanks though.
M
> On 29 Sep 2015, at 09:54, Luis J. Salvatierra <ljsal...@gmail.com> wrote:
>
> Hi Matt,
>
> have you tried to build with the option 'MITK_USE_SYSTEM_PYTHON'
> enabled? If you enable this option you'll have to set the
> 'PYTHON_EXECUTABLE' and 'PYTHON_INCLUDE_DIR' paths in the advance mode
> (ccmake).
>
> Regards,
> Luis
>
> On 29/09/15 06:03, Clarkson, Matt wrote:
>> Hi All,
>>
>> we just upgraded to 2015.05.2 (yeah… thanks!). Ive been meaning to try the
>> python console for ages. But we have a different superbuild and folder
>> structure. So, I got our superbuild to build all the dependencies ZLIB,
>> PCRE, SWIG, Numpy, Python, SimpleITK, VTK with Python, CTK with Python and
>> MITK with Python on. All, no problem, the plugin builds fine. I have also
>> separately built the MITK 2015.05.2 release from MITK/master with Python
>> console turned on.
>>
>> In MitkWorkbench, on the Mac Terminal, I run the MitkWorkbench, and
>> everything launches, and I can see a Python console. Coooool.
>>
>> In our app, on the Mac Terminal, I run the app, and the app crashes, with
>> the error message: "ImportError: No module named site"
>>
>> If I remove the python plugin from the provisioning file, our app launches
>> but obviously without any Python plugin obviously.
>>
>> So, when I google around, I set:
>>
>> export
>> PYTHONHOME=/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/
>> export
>> PYTHONPATH=/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/
>>
>> Then run our app:
>>
>> bin/NiftyView.app/Contents/MacOS/NiftyView
>> Traceback (most recent call last):
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/site.py",
>> line 563, in <module>
>> main()
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/site.py",
>> line 545, in main
>> known_paths = addusersitepackages(known_paths)
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/site.py",
>> line 278, in addusersitepackages
>> user_site = getusersitepackages()
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/site.py",
>> line 253, in getusersitepackages
>> user_base = getuserbase() # this will also set USER_BASE
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/site.py",
>> line 243, in getuserbase
>> USER_BASE = get_config_var('userbase')
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/sysconfig.py",
>> line 521, in get_config_var
>> return get_config_vars().get(name)
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/sysconfig.py",
>> line 420, in get_config_vars
>> _init_posix(_CONFIG_VARS)
>> File
>> "/Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/Python/install/lib/python2.7/sysconfig.py",
>> line 288, in _init_posix
>> raise IOError(msg)
>> IOError: invalid Python installation: unable to open
>> /Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/MITK/build/ep/lib/python2.7/config/Makefile
>> (No such file or directory)
>>
>> Can anyone explain this? Why does the build of our app look for a file in
>> the MITK/build/ep folder for any config at all? The only things in there are
>> a few small libraries, as most of the dependencies we build ourselves before
>> passing them to MITK.
>>
>> ls /Users/mattclarkson/build/NifTK-4338-SuperBuild-Release/MITK/build/ep/lib/
>> cmake libPocoUtild.30.dylib
>> libannd.1.1.2.dylib libqwtd.6.1.0.dylib
>> libPocoFoundationd.1.6.0.dylib libPocoUtild.dylib
>> libannd.dylib libqwtd.dylib
>> libPocoFoundationd.30.dylib libPocoXMLd.30.dylib
>> libcppunitd.1.12.1.dylib libtinyxmld.2.6.2.dylib
>> libPocoFoundationd.dylib libPocoXMLd.dylib
>> libcppunitd.dylib libtinyxmld.dylib
>> libPocoJSONd.30.dylib libPocoZipd.30.dylib
>> libglewd.1.10.0.dylib
>> libPocoJSONd.dylib libPocoZipd.dylib libglewd.dylib
>>
>> Thanks
>>
>> Matt
>>
>> ------------------------------------------------------------------------------
>> _______________________________________________
>> mitk-users mailing list
>> mitk-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/mitk-users
>>
>
> --
> Luis J. Salvatierra
> http://www.ljsalvatierra.com
> @Luisja_350
> Python San Sebastián - ACPySS
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