Hi Stefan,

When I run the command “git pull” in the MITK source directory , it outputted 
as follows. It looks the source directory was revised during the making process.
Did I set the wrong CMake parameters?

BTW, I compiled with the “DiffusionRelease”configuration.

Any help will be deeply appreciated.

Maxwell.


MITK git:(master) git pull
-----
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/src/internal/org_mitk_gui_qt_matchpoint_algorithm_batch_Activator.h
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/src/internal/org_mitk_gui_qt_matchpoint_algorithm_batch_Activator.cpp
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/src/internal/QmitkMatchPointBatchProcessor.ui
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/src/internal/QmitkMatchPointBatchProcessor.h
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/src/internal/QmitkMatchPointBatchProcessor.cpp
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/resources/readme_icon.txt
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/resources/icon_unlock.png
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/resources/icon_lock.png
Removing Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/resources/icon.svg
Removing Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/plugin.xml
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/manifest_headers.cmake
Removing Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/files.cmake
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/documentation/doxygen/modules.dox
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/documentation/UserManual/map_icon_batch_doc.svg
Removing 
Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/documentation/UserManual/Manual.dox
Removing Plugins/org.mitk.gui.qt.matchpoint.algorithm.batch/CMakeLists.txt
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/org_mitk_gui_qt_coreapplication_Activator.h
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/org_mitk_gui_qt_coreapplication_Activator.cpp
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkWorkbenchWindowAdvisor.h
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkWorkbenchWindowAdvisor.cpp
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkWorkbenchAdvisor.h
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkWorkbenchAdvisor.cpp
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkDefaultPerspective.h
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkDefaultPerspective.cpp
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkCoreApplication.h
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkCoreApplication.cpp
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkActionBarAdvisor.h
Removing 
Plugins/org.mitk.gui.qt.coreapplication/src/internal/QmitkActionBarAdvisor.cpp
Removing Plugins/org.mitk.gui.qt.coreapplication/plugin.xml
Removing Plugins/org.mitk.gui.qt.coreapplication/manifest_headers.cmake
Removing Plugins/org.mitk.gui.qt.coreapplication/files.cmake
Removing 
Plugins/org.mitk.gui.qt.coreapplication/documentation/doxygen/modules.dox
Removing Plugins/org.mitk.gui.qt.coreapplication/CMakeLists.txt
Removing 
Plugins/org.mitk.gui.qt.common/testing/src/internal/mitkPluginActivator.h
Removing 
Plugins/org.mitk.gui.qt.common/testing/src/internal/mitkPluginActivator.cpp
Removing Plugins/org.mitk.gui.qt.common/testing/src/api/QmitkUiApiTestSuite.h
Removing Plugins/org.mitk.gui.qt.common/testing/src/api/QmitkUiApiTestSuite.cpp
Removing Plugins/org.mitk.gui.qt.common/testing/src/api/QmitkMockFunctionality.h
Removing 
Plugins/org.mitk.gui.qt.common/testing/src/api/QmitkMockFunctionality.cpp
Removing Plugins/org.mitk.gui.qt.common/testing/src/api/QmitkFunctionalityTest.h
Removing 
Plugins/org.mitk.gui.qt.common/testing/src/api/QmitkFunctionalityTest.cpp
Removing Plugins/org.mitk.gui.qt.common/testing/src/QmitkQtCommonTestSuite.h
Removing Plugins/org.mitk.gui.qt.common/testing/src/QmitkQtCommonTestSuite.cpp
Removing Plugins/org.mitk.gui.qt.common/testing/plugin.xml
Removing Plugins/org.mitk.gui.qt.common/testing/manifest_headers.cmake
Removing Plugins/org.mitk.gui.qt.common/testing/manifest.cpp
Removing Plugins/org.mitk.gui.qt.common/testing/files.cmake
Removing Plugins/org.mitk.gui.qt.common/testing/CMakeLists.txt
Removing Plugins/org.blueberry.uitest/src/util/berryUITestCaller.h
Removing Plugins/org.blueberry.uitest/src/util/berryEmptyPerspective.h
Removing Plugins/org.blueberry.uitest/src/util/berryEmptyPerspective.cpp
Removing 
Plugins/org.blueberry.uitest/src/internal/berryUITestWorkbenchWindowAdvisor.h
Removing 
Plugins/org.blueberry.uitest/src/internal/berryUITestWorkbenchWindowAdvisor.cpp
Removing Plugins/org.blueberry.uitest/src/internal/berryUITestWorkbenchAdvisor.h
Removing 
Plugins/org.blueberry.uitest/src/internal/berryUITestWorkbenchAdvisor.cpp
Removing Plugins/org.blueberry.uitest/src/internal/berryPluginActivator.h
Removing Plugins/org.blueberry.uitest/src/internal/berryPluginActivator.cpp
Removing Plugins/org.blueberry.uitest/src/harness/berryUITestCase.h
Removing Plugins/org.blueberry.uitest/src/harness/berryUITestCase.cpp
Removing Plugins/org.blueberry.uitest/src/berryUITestApplication.h
Removing Plugins/org.blueberry.uitest/src/berryUITestApplication.cpp
Removing Plugins/org.blueberry.uitest/plugin.xml
Removing Plugins/org.blueberry.uitest/manifest_headers.cmake
Removing Plugins/org.blueberry.uitest/files.cmake
Removing Plugins/org.blueberry.uitest/documentation/doxygen/modules.dox
Removing Plugins/org.blueberry.uitest/CMakeLists.txt
Removing Plugins/org.blueberry.test/src/util/berryCallHistory.h
Removing Plugins/org.blueberry.test/src/util/berryCallHistory.cpp
Removing Plugins/org.blueberry.test/src/internal/berryTestRegistry.h
Removing Plugins/org.blueberry.test/src/internal/berryTestRegistry.cpp
Removing Plugins/org.blueberry.test/src/internal/berryTestDescriptor.h
Removing Plugins/org.blueberry.test/src/internal/berryTestDescriptor.cpp
Removing Plugins/org.blueberry.test/src/internal/berryPluginActivator.h
Removing Plugins/org.blueberry.test/src/internal/berryPluginActivator.cpp
Removing Plugins/org.blueberry.test/src/harness/berryTestCase.h
Removing Plugins/org.blueberry.test/src/harness/berryTestCase.cpp
Removing Plugins/org.blueberry.test/src/berryITestDescriptor.h
Removing Plugins/org.blueberry.test/src/berryCoreTestApplication.h
Removing Plugins/org.blueberry.test/src/berryCoreTestApplication.cpp
Removing Plugins/org.blueberry.test/src/berryBlueBerryTestDriver.h
Removing Plugins/org.blueberry.test/src/berryBlueBerryTestDriver.cpp
Removing Plugins/org.blueberry.test/schema/tests.exsd
Removing Plugins/org.blueberry.test/plugin.xml
Removing Plugins/org.blueberry.test/manifest_headers.cmake
Removing Plugins/org.blueberry.test/files.cmake
Removing Plugins/org.blueberry.test/documentation/doxygen/modules.dox
Removing Plugins/org.blueberry.test/CMakeLists.txt
Removing Plugins/Testing/org.blueberry.ui.tests/src/berryUiTestSuite.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/berryUiTestSuite.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/berryPluginActivator.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/berryPluginActivator.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryXMLMementoTest.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryXMLMementoTest.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryUiApiTestSuite.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryUiApiTestSuite.cpp
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berrySaveableMockViewPart.h
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berrySaveableMockViewPart.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryMockWorkbenchPart.h
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berryMockWorkbenchPart.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryMockViewPart.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryMockViewPart.cpp
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berryMockSelectionProvider.h
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berryMockSelectionProvider.cpp
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berryIWorkbenchPartTest.h
Removing 
Plugins/Testing/org.blueberry.ui.tests/src/api/berryIWorkbenchPartTest.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryIViewPartTest.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryIViewPartTest.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryIPageLayoutTest.h
Removing Plugins/Testing/org.blueberry.ui.tests/src/api/berryIPageLayoutTest.cpp
Removing Plugins/Testing/org.blueberry.ui.tests/plugin.xml
Removing Plugins/Testing/org.blueberry.ui.tests/manifest_headers.cmake
Removing Plugins/Testing/org.blueberry.ui.tests/icons/view.gif
Removing Plugins/Testing/org.blueberry.ui.tests/files.cmake
Removing 
Plugins/Testing/org.blueberry.ui.tests/documentation/doxygen/modules.dox
Removing Plugins/Testing/org.blueberry.ui.tests/CMakeLists.txt
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryWeakPointerTest.h
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryWeakPointerTest.cpp
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berrySmartPointerTest.h
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berrySmartPointerTest.cpp
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryPluginActivator.h
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryPluginActivator.cpp
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryObjectTest.h
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryObjectTest.cpp
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryOSGiCoreTestSuite.h
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryOSGiCoreTestSuite.cpp
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryMessageTest.h
Removing Plugins/Testing/org.blueberry.osgi.tests/src/berryMessageTest.cpp
Removing Plugins/Testing/org.blueberry.osgi.tests/plugin.xml
Removing Plugins/Testing/org.blueberry.osgi.tests/manifest_headers.cmake
Removing Plugins/Testing/org.blueberry.osgi.tests/files.cmake
Removing Plugins/Testing/org.blueberry.osgi.tests/CMakeLists.txt
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryPreferencesTest.h
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryPreferencesTest.cpp
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryPreferencesServiceTest.h
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryPreferencesServiceTest.cpp
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryPluginActivator.h
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryPluginActivator.cpp
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryCoreRuntimeTestSuite.h
Removing 
Plugins/Testing/org.blueberry.core.runtime.tests/src/berryCoreRuntimeTestSuite.cpp
Removing Plugins/Testing/org.blueberry.core.runtime.tests/plugin.xml
Removing Plugins/Testing/org.blueberry.core.runtime.tests/manifest_headers.cmake
Removing Plugins/Testing/org.blueberry.core.runtime.tests/files.cmake
Removing Plugins/Testing/org.blueberry.core.runtime.tests/CMakeLists.txt
Removing Modules/TumorInvasionAnalysis/test/mitkClassificationTest.cpp
Removing Modules/TumorInvasionAnalysis/test/files.cmake
Removing Modules/TumorInvasionAnalysis/test/CMakeLists.txt
Removing 
Modules/TumorInvasionAnalysis/src/ReaderWriter/mitkDiffusionCollectionWriter.cpp
Removing 
Modules/TumorInvasionAnalysis/src/ReaderWriter/mitkDiffusionCollectionReader.cpp
Removing 
Modules/TumorInvasionAnalysis/src/ImageFilters/mitkCollectionGrayOpening.cpp
Removing 
Modules/TumorInvasionAnalysis/src/ImageFilters/mitkCollectionDilatation.cpp
Removing 
Modules/TumorInvasionAnalysis/src/Classification/mitkTumorInvasionClassification.cpp
Removing Modules/TumorInvasionAnalysis/include/mitkTumorInvasionClassification.h
Removing Modules/TumorInvasionAnalysis/include/mitkDiffusionCollectionWriter.h
Removing Modules/TumorInvasionAnalysis/include/mitkDiffusionCollectionReader.h
Removing Modules/TumorInvasionAnalysis/include/mitkCollectionGrayOpening.h
Removing Modules/TumorInvasionAnalysis/include/mitkCollectionDilatation.h
Removing Modules/TumorInvasionAnalysis/include/itkConnectednessFilter.h
Removing Modules/TumorInvasionAnalysis/include/itkConnectednessFilter.cxx
Removing Modules/TumorInvasionAnalysis/files.cmake
Removing Modules/TumorInvasionAnalysis/MiniApps/typeExtension.h
Removing Modules/TumorInvasionAnalysis/MiniApps/TumorResponseEvaluationTool.cpp
Removing Modules/TumorInvasionAnalysis/MiniApps/TumorProgressionMapping.cpp
Removing Modules/TumorInvasionAnalysis/MiniApps/TumorInvasionAnalysisTool.cpp
Removing Modules/TumorInvasionAnalysis/MiniApps/MriOtsuNormalization.cpp
Removing Modules/TumorInvasionAnalysis/MiniApps/MriNormalization.cpp
Merge branch 'master' of https://github.com/MITK/MITK
Removing Modules/TumorInvasionAnalysis/MiniApps/HistogramAdaption.cpp
Removing Modules/TumorInvasionAnalysis/MiniApps/ConnectednessFeatureMaps.cpp
Removing Modules/TumorInvasionAnalysis/MiniApps/CMakeLists.txt
Removing Modules/TumorInvasionAnalysis/MiniApps/BasicDistanceMaps.cpp
Removing Modules/TumorInvasionAnalysis/CMakeLists.txt
Removing Modules/QtWidgetsExt/src/QmitkFunctionalityComponentContainer.cpp
Removing Modules/QtWidgetsExt/include/QmitkFunctionalityComponentContainer.h
Removing Examples/Tutorial/QtTesting.h
Removing Examples/Tutorial/QtTesting.cpp
Auto-merging CMakeLists.txt
Removing CMake/mitkFunctionTestPlugin.cmake
Removing Applications/Solstice/MitkSolsticeUI.cpp
Removing Applications/Solstice/MitkSolstice.ini
Removing Applications/Solstice/MitkSolstice.cpp
Removing Applications/Solstice/CMakeLists.txt
Removing Applications/CoreApp/target_libraries.cmake
Removing Applications/CoreApp/startMitkCoreApp.bat.in
Removing Applications/CoreApp/icons/icon.png
Removing Applications/CoreApp/icons/icon.ico
Removing Applications/CoreApp/icons/icon.icns
Removing Applications/CoreApp/icons/CoreApp.rc
Removing Applications/CoreApp/MitkCoreApp.ini
Removing Applications/CoreApp/MitkCoreApp.cpp
Removing Applications/CoreApp/CMakeLists.txt
Merge made by the 'recursive' strategy.
Applications/AppList.cmake                         |   2 -
Applications/CoreApp/CMakeLists.txt                |  27 -
Applications/CoreApp/MitkCoreApp.cpp               |  46 --
Applications/CoreApp/MitkCoreApp.ini               |
…




发件人: "Dinkelacker, Stefan" <s.dinkelac...@dkfz-heidelberg.de>
日期: 2020年2月3日 星期一 下午8:34
收件人: "enjoy3d...@gmail.com" <enjoy3d...@gmail.com>, 
"mitk-users@lists.sourceforge.net" <mitk-users@lists.sourceforge.net>
主题: RE: [mitk-users] CMaker Error: Target "***" links to target "Eigen3::Eigen" 
but the target was not found.

Hi, I just checked the MitkMatchPointRegistration module and it hasn’t a direct 
nor transitive dependency to Eigen. I guess you modified MITK somehow? Even in 
other modules that depend on Eigen there’s just the legacy notation “Eigen”, 
not “Eigen3::Eigen”.

Best,
Stefan

From: enjoy3d...@gmail.com [mailto:enjoy3d...@gmail.com]
Sent: Sunday, February 2, 2020 1:06 PM
To: mitk-users@lists.sourceforge.net
Subject: [mitk-users] CMaker Error: Target "***" links to target 
"Eigen3::Eigen" but the target was not found.

Dear MITKers:

I was trying to build MITK (clone lastest) on Mac OS Catalina (10.15.2) using 
CMake 3.16.2. I have gotten hundreds of errors similar to the following:

....
-- Configuring done

CMake Error at CMake/mitkFunctionCreateModule.cmake:463 (add_library):
  Target "MitkMatchPointRegistration" links to target "Eigen3::Eigen" but the
  target was not found.  Perhaps a find_package() call is missing for an
  IMPORTED target, or an ALIAS target is missing?
Call Stack (most recent call first):
  Modules/MatchPointRegistration/CMakeLists.txt:1 (MITK_CREATE_MODULE)
.....
Moreover, each error has appeared 7 times continuously.

The default version of Eigen in MITK  is 3.2.8. In order to get the newest 
version of Eigen(3.3.7), I have tried to two ways:
1. brew install eigen, then changed the "exteral eigen dir to installed/path;
2. modify the URL in the source file MITK/CMakeExternals/Eigen.cmake.

However, I got the same errors.

Thanks in advance

Maxwell
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