See this tutorial for converting tif to hgt
http://www.oruxmaps.com/foro/viewtopic.php?t=3612#
<http://www.oruxmaps.com/foro/viewtopic.php?t=3612#>  

I just created a linux shell script to replace the "tif2hgt.bat"
tif2hgt.sh <http://gis.19327.n8.nabble.com/file/t339543/tif2hgt.sh>  

PS: Just note the "holes" are usually called "voids"



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