The following module was proposed for inclusion in the Module List:
modid: BioX::DB::SCOP
DSLIP: adpOp
description: Interface to SCOP database files
userid: WALSHTP (Tom Walsh)
chapterid: 7 (Database_Interfaces)
communities:
similar:
Bio::Tools::Run::PiseApplication::scopparse
rationale:
I've chosen BioX::DB::SCOP as the namespace to avoid confusion with
the Bioperl project modules in the Bio namespace, and because the
module is an interface for the parseable files distributed by the
SCOP database (http://scop.mrc-lmb.cam.ac.uk/scop).
Bio::Tools::Run::PiseApplication::scopparse also parses SCOP files
but only to convert them to a specific file format. BioX::DB:SCOP
creates an object-oriented representation of the entities in SCOP
that can be used for a range of purposes.
enteredby: WALSHTP (Tom Walsh)
enteredon: Tue Nov 9 14:26:49 2010 GMT
The resulting entry would be:
BioX::DB::
::SCOP adpOp Interface to SCOP database files WALSHTP
Thanks for registering,
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