Is there a way to make apache work even when such deadlock occur? Can
a process be killed and restarted automatically? I know, it is not a
solution for actual problem and should be solved by eliminating
deadlock, but the goal is to make production server work while
debugging the problem.
I tried all options of modwsgi that seemed relevant, but could not
achieve stable apache counficuration. It stuck after some time for
about 5 hours.

On Apr 25, 2:51 am, Graham Dumpleton <[email protected]>
wrote:
> That many threads was never a good idea.
>
> A possible reason why you are seeing less problems with only 5 threads
> in a process is that your code or a third party C extension is not
> thread safe and are perhaps deadlocking.
>
> You really need to ascertain when process threads are starting to hang and 
> use:
>
>  http://code.google.com/p/modwsgi/wiki/DebuggingTechniques#Extracting_...
>  http://code.google.com/p/modwsgi/wiki/DebuggingTechniques#Debugging_C...
>
> to work out what it is doing at that time.
>
> Graham
>
> On 24 April 2011 03:38, Chase <[email protected]> wrote:
>
>
>
>
>
>
>
> > Changed the config from 1 process 50 threads to 3 processed 5 threads.
> > That seems to have solved it, or at least made it much less likely.
>
> >  -Chase
>
> > On Apr 16, 7:56 am, Chase <[email protected]> wrote:
> >> The problem persists. I have removed our calls to lxml; they were not
> >> critical. We'll see what effect that has going forward.
>
> >>    -Chase
>
> >> On Apr 16, 12:08 am, Graham Dumpleton <[email protected]>
> >> wrote:
>
> >> > On 16 April 2011 01:04, Chase <[email protected]> wrote:
>
> >> > > Wow, lots of good info. Thanks guys! I have made the
> >> > > "WSGIApplicationGroup %{GLOBAL}" change for now; we'll see if that
> >> > > clears it up over the next week or so.
>
> >> > > As for running in prefork, I have not made that change yet. But here
> >> > > is the documentation that lead me to believe this was preferred:
>
> >> > >http://code.google.com/p/modwsgi/wiki/IntegrationWithDjango
>
> >> > > "Now, traditional wisdom in respect of Django has been that it should
> >> > > perferably only be used on single threaded servers. This would mean
> >> > > for Apache using the single threaded 'prefork' MPM on UNIX systems and
> >> > > avoiding the multithreaded 'worker' MPM."
>
> >> > > Also, the older modpython docs also advised this:
>
> >> > >http://docs.djangoproject.com/en/dev/howto/deployment/modpython/?from...
>
> >> > > "Django requires Apache 2.x and mod_python 3.x, and you should use
> >> > > Apache’s prefork MPM, as opposed to the worker MPM."
>
> >> > > Can you link to a discussion of the subtle problems reported with
> >> > > prefork? Thanks again,
>
> >> > That section was more relevant when Django 1.0 had only just come out,
> >> > which was the first version of Django for which the core was
> >> > supposedly thread safe.
>
> >> > Anyway, the MPM you use isn't particularly relevant as you are using
> >> > daemon mode and not embedded mode. Which MPM you use is only critical
> >> > if you are using embedded mode.
>
> >> > In daemon mode you have the arbitrary ability to control
> >> > processes/threads based on whether your application is thread safe.
>
> >> > For related reading see:
>
> >> >  http://code.google.com/p/modwsgi/wiki/ProcessesAndThreading
> >> >  http://blog.dscpl.com.au/2009/03/load-spikes-and-excessive-memory-usa...
>
> >> > BTW, the IntegrationWithDjango page in the wiki is likely to be
> >> > completely removed at some point in the near future and I will stop
> >> > providing details for specific frameworks to cover where frameworks
> >> > don't themselves provide enough information. I have already removed
> >> > the pages for most of the other frameworks already. End result is that
> >> > the frameworks themselves will need to provide decent documentation
> >> > themselves to cover any idiosyncrasies that exist in setting up their
> >> > framework to work with mod_wsgi which are due to issues or design
> >> > decisions related to their framework and which are nothing to do with
> >> > mod_wsgi. I have had enough of trying to document these framework
> >> > specific subtleties and framework authors tend to express a belief
> >> > that their own documentation is already more than adequate even though
> >> > from what I have seen people still get tripped up when they follow
> >> > only the documentation provided by the framework. So, I will be
> >> > devoting my time elsewhere now and not worrying about documenting
> >> > stuff related to the frameworks or actively assisting users of
> >> > frameworks on forums related to those frameworks or on general forums
> >> > such as StackOverflow. Instead, if it is a framework specific issue,
> >> > you will need to seek help from the developers or the community for
> >> > that framework.
>
> >> > Graham
>
> >> > >   -Chase
>
> >> > > On Apr 14, 6:30 pm, Graham Dumpleton <[email protected]>
> >> > > wrote:
> >> > >> On 15 April 2011 05:18, Chase <[email protected]> wrote:
>
> >> > >> > I have a custom Django app that's becoming unresponsive
> >> > >> > intermittently. About once every couple of days between three 
> >> > >> > servers,
> >> > >> > serving about 10,000 requests a day. When it happens, it never
> >> > >> > recovers. I can leave it there for hours, and it will not server any
> >> > >> > more requests.
>
> >> > >> > In the apache logs, I see see the following:
>
> >> > >> > Apr 13 11:45:07 www3 apache2[27590]: **successful view render here**
> >> > >> > ...
> >> > >> > Apr 13 11:47:11 www3 apache2[24032]: [error] server is within
> >> > >> > MinSpareThreads of MaxClients, consider raising the MaxClients 
> >> > >> > setting
> >> > >> > Apr 13 11:47:43 www3 apache2[24032]: [error] server reached 
> >> > >> > MaxClients
> >> > >> > setting, consider raising the MaxClients setting
> >> > >> > ...
> >> > >> > Apr 13 11:50:34 www3 apache2[27617]: [error] [client 10.177.0.204]
> >> > >> > Script timed out before returning headers: django.wsgi
> >> > >> > (repeated 100 times, exactly)
>
> >> > >> > I am running:
>
> >> > >> > apache version 2.2, using the worker MPM
> >> > >> > wsgi version 2.8
> >> > >> > SELinux NOT installed
> >> > >> > lxml package being used, infrequently
> >> > >> > Ubuntu 10.04
>
> >> > >> > apache config:
>
> >> > >> > WSGIDaemonProcess site-1 user=django group=django threads=50
> >> > >> > WSGIProcessGroup site-1
> >> > >> > WSGIScriptAlias / /somepath/django.wsgi /somepath/django.wsgi
>
> >> > >> > wsgi config:
>
> >> > >> > import os, sys
> >> > >> > sys.path.append('/home/django')
> >> > >> > os.environ['DJANGO_SETTINGS_MODULE'] = 'myapp.settings'
> >> > >> > import django.core.handlers.wsgi
> >> > >> > application = django.core.handlers.wsgi.WSGIHandler()
>
> >> > >> > When this happens, I can kill the wsgi process and the server will
> >> > >> > recover.
>
> >> > >> >>ps aux|grep django # process is running as user "django"
> >> > >> > django   27590  5.3 17.4 908024 178760 ?       Sl   Apr12  76:09 
> >> > >> > /usr/
> >> > >> > sbin/apache2 -k start
> >> > >> >>kill -9 27590
>
> >> > >> > This leads me to believe that the problem is a known issue:
>
> >> > >> > "(deadlock-timeout) Defines the maximum number of seconds allowed to
> >> > >> > pass before the daemon process is shutdown and restarted after a
> >> > >> > potential deadlock on the Python GIL has been detected. The default 
> >> > >> > is
> >> > >> > 300 seconds. This option exists to combat the problem of a daemon
> >> > >> > process freezing as the result of a rouge Python C extension module
> >> > >> > which doesn't properly release the Python GIL when entering into a
> >> > >> > blocking or long running operation."
>
> >> > >> > However, I'm not sure why this condition is not clearing
> >> > >> > automatically. I do see that the script timeout occurs exactly 5
> >> > >> > minutes after the last successful page render, so the 
> >> > >> > deadlock-timeout
> >> > >> > is getting triggered. But it does not actually kill the process.
>
> >> > >> They likely aren't being killed because there isn't actually a
> >> > >> deadlock of a single thread which hasn't release the GIL.
>
> >> > >> In other words, what the dead lock timeout will not protect against is
> >> > >> threads calling into C code, releasing the GIL and then deadlocking in
> >> > >> C code.
>
> >> > >> In your case, the problem is going to be the lxml module. This module
> >> > >> is known not to work in Python sub interpreters properly.
> >> > >> Specifically, the lxml can release the GIL and then attempt to do a
> >> > >> callback into Python code. To do this, it uses the simplified GIL
> >> > >> state API in Python to reacquire the GIL, but that API is only
> >> > >> supposed to be used if running in the main Python interpreter and not
> >> > >> a sub interpreter. When used in a sub interpreter, the code will
> >> > >> deadlock on trying to reacquire the Python GIL.
>
> >> > >> That lxml is a problem is documented in:
>
> >> > >>  http://code.google.com/p/modwsgi/wiki/ApplicationIssues#Multiple_Pyth...
>
> >> > >> The solution, since you are only delegating one application to that
> >> > >> mod_wsgi daemon process group, is to add:
>
> >> > >>   WSGIApplicationGroup %{GLOBAL}
>
> >> > >> This will force the application to run in the main Python interpreter
> >> > >> and avoid the shortcomings of lxml module.
>
> >> > >> As how you might protect against this sort of deadlock in C code when
> >> > >> GIL isn't locked, the only way is to use 'inactivity-timeout'. This
> >> > >> will cause a restart when there has been no new requests and/or no
> >> > >> reading of request content or generation of response content for that
> >> > >> timeout period. So, this could be used as a fail safe, but if your
> >> > >> application is used in frequently, it will also have the affect of
> >> > >> causing your idle process to be restarted after the timeout period as
> >> > >> well.
>
> >> > >> BTW, in worst cases, for detecting what process is doing, one can use 
> >> > >> either:
>
> >> > >>  http://code.google.com/p/modwsgi/wiki/DebuggingTechniques#Extracting_...
> >> > >>  http://code.google.com/p/modwsgi/wiki/DebuggingTechniques#Debugging_C...
>
> >> > >> > I'm thinking of switching to MPM/prefork, but I'm not sure if that
> >> > >> > should have any effect, given that I'm in daemon mode already.
>
> >> > >> Prefork for some people has been causing subtle problems and I would
> >> > >> avoid it if you can.
>
> >> > >> Graham
>
> >> > > --
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> >> > > Groups "modwsgi" group.
> >> > > To post to this group, send email to [email protected].
> >> > > To unsubscribe from this
>
> ...
>
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