Hi Mike,

Thank you so much! This was very helpful and I was able to get the
distances.

Best,
Dag

On Sun, Oct 16, 2022 at 9:40 PM Mike Collyer <[email protected]> wrote:

> Dear Dag,
>
> When running the GPA with the gpagen function in geomorph, use the
> argument verbose = TRUE and it will include the Procrustes distances among
> specimens as output. This can take a while with large data sets, which is
> why it is not set as a default.
>
> Cheers!
> Mike
>
> Sent from my iPhone
>
> On Oct 16, 2022, at 9:33 PM, Dagmawit Getahun <[email protected]> wrote:
>
> Hi all,
>
> I have a dataset of 3D cranial landmarks in the Morphologika file format
> as a text file. I was able to upload it and run a GPA as well as PCA in R
> using geomorph and I wanted to know if there was an R code to analyze the
> actual Procrustes distances between the specimens in my dataset and whether
> I can do that in the format that my data set is in?
>
> Thanks in advance for the help!
>
> Best,
> Dag
>
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-- 

Dagmawit Abebe Getahun

Doctoral Candidate

Physical Anthropology

The Graduate Center , CUNY

New York Consortium in Evolutionary Primatology


Adjunct Lecturer, Anthropology Department

Lehman College, CUNY

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