The user manual put "*initially* scaled to Unit Centroid Size". I am not 
sure if there is some untold meaning in using "initially", which seems to 
suggest CSinit controls whether to initially scale to unict CS while 
finally, objects will anyhow scaled to unit centroid size. 

I am not trying to explain anything. Just got the same question and would 
like to invite more expert opinions. 

Kieran

On Wednesday, October 19, 2022 at 1:24:39 PM UTC+8 [email protected] wrote:

> Dear all,
>
> The user manual for Morpho provided the following explanation for CSinit:
>
> "logical: if TRUE, all configurations are initially scaled to Unit 
> Centroid Size."
>
> This seems to suggest setting CSinit=FALSE would result in objects of 
> varying centroid size after GPA. 
>
> In the paper "Assessing thoraco-pelvic covariation in Homo sapiens and Pan 
> troglodytes: A 3D geometric morphometric approach", the authors mentioned 
> "First, the landmarks configurations were translated, rotated and scaled to 
> Unit Centroid Size". This seems to suggest CSinit=TRUE. However, in the 
> source code provided by the authors, CSinit was set to FALSE:
>
> Females_adult_GPA <- procSym(Females_adult,CSinit = FALSE)
> Males_adult_GPA <- procSym(Males_adult,CSinit = FALSE)
>
> I am confused what on earth does CSinit mean in procSym. Why it was set to 
> FALSE but the author still claimed objects were scaled to unit centroid 
> size?
>
> Thank you.
> Lv
>

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