[The original submission had embedded graphics that do not show up in the text-only version below. -the morphmet mod (dslice) ]

-------- Original Message --------
Subject:        help
Date:   Thu, 14 Jul 2011 18:19:59 -0400
From:   Julien Sastre <[email protected]>
To:     [email protected]



Hi,

I'm a new to geometric morphometrics analysis and I'm working on cranial growth.

In order to assess the reliability of the method, landmarks have been positionned twice by the same observer and twice by two differents observers.

I would like to perform a Procrustes ANOVA in order to know if there is differences between the two measurement.

For the reproductibility, I made a classifier "individual" where the same individuals are presents twice and a classifier "measure_serie" numbered 1 (=first measurement) or 2 (=second measurement).



Then I perfomed a Procruste Anova


And I obtained
Procrustes ANOVA: Procrustes ANOVA ...
Dataset: reproductibilité

Classifiers used for the Procrustes ANOVA:
Individuals: individual
Error 1: measure_serie

Centroid size:
EffectSSMSdf F P (param.)
Individual 2649,306645 294,367405 9 450,34 <.0001
Error 1 6,536558 0,653656 10

Shape, Procrustes ANOVA:
EffectSSMSdf F P (param.) Pillai tr. P (param.)
Individual 0,07606574 0,0000676140 1125 0,02 1,0000
Error 1 4,05229641 0,0032418371 1250

And I conclued that the two measurements are not significantly differents.
Is the method valid?

Any help is great.
    Thanks.


Julien

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