I am currently trying to test the degree of difference (measured as a 
Mahalanobis distance) between two groups.

To give some background I have 2 groups of fish that differ in their life 
history strategy (groups A and B), these two groups have then been exposed to 
different conditions to induce a phenotypic response (conditions 1 and 2). I 
have then compared these groups in MorphoJ using a single canonical variate 
analysis.

The out put gives me a Mahalanobis distance for all comparisons but the ones I 
am interested in are for fish group A1 and A2 and for the fish group B1 and B2.

The question I want to answer is one group more plastic in their response to 
the 2 different conditions - So I need to test if the Mahalanobis distance 
between A1 and A2 fish is significantly more, less or not significant than the 
Mahalanobis distance between B1 and B2, fish but there is no variation around 
the Mahalanobis distance to allow a test..

Is there a way of extracting all the Mahlanobis distances for each individual 
from MorphoJ so I can then test these in a linear model or equivalent?

Or does anyone know a way of doing this?

Thanks in advance
Oliver Hooker
PR~Statistics

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