Dear Chris,

Could you more precisely define what you mean by “horizontally inverted”.  Does 
it appear that your specimens are rotated approximately 180 degrees from 
expected?  Or does it appear that the specimens are flipped on the horizontal 
axis?  In geomorph, we have steps to prevent the latter (at least, it is our 
intention).  But if this is happening, I would like more details, so that we 
might examine the problem and fix it.

Bst,
Mike

Associate Professor
Biostatistics
Department of Biology
Western Kentucky University
1906 College Heights Blvd. #11080
Bowling Green, KY 42101-1080
Phone: 270-745-8765; Fax: 270-745-6856
Email: michael.coll...@wku.edu<mailto:michael.coll...@wku.edu>

Note: This email address will soon be terminated.  Here is my new contact info:

Michael Collyer
Associate Professor
Program Director, MS Biology
Chatham University
Buhl 006, Woodland Rd
Pittsburgh, PA15232
Email: m.coll...@chatham.edu<mailto:m.coll...@chatham.edu>

On Sep 1, 2016, at 3:04 PM, Christopher Marshall 
<marsh...@tamug.edu<mailto:marsh...@tamug.edu>> wrote:

Dear Group,

I'm digitizing landmarks for geometric morphometics using TPSDig and plotting 
the data from a .TPS file in Geomorph in R.

For a newly digitized dataset the plot of the aligned landmarks of all 
specimens is horizontally inverted

This is not the case for an older dataset also digitized using TPSDig.

This must be a common issue but am unable to resolve.  Any suggestions?

Thanks in advance,
CDM

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