Hi, I am wondering if any one can help me. I have been running a Procrustes Rotation of Two Configurations and PROTEST using the vegan package in R. The Procrustes seem to be working but I am having an issue with the results of the PROTEST and the correlation values.
I am getting identical p values every time I run the script. I have a sample size of 20 projectile points and every time I run the statistics my p value is equal to 0.00009999. I ran a test and I compared a circle to one of my projectile points and I still got a p value of 0.00009999. Here are the results for the test of the projectile point compared to a circle: Procrustes sum of squares: 1.817e+04 Call: protest(X = p730, Y = pTest, permutations = 10000) Procrustes Sum of Squares (m12 squared): 0.06296 Correlation in a symmetric Procrustes rotation: 0.968 Significance: 9.999e-05 Permutation: free Number of permutations: 10000 If anyone has any idea of why this could be happening or how to fix it that would be greatly appreciated. Thanks Callie Diduck -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org --- You received this message because you are subscribed to the Google Groups "MORPHMET" group. To unsubscribe from this group and stop receiving emails from it, send an email to morphmet+unsubscr...@morphometrics.org.