Hi,
First, I must say that I've used the mert script and it works well. However, when I tried to parallelize it by submitting say.. 10 jobs, I don't get faster MERT iterations. In fact, it's slower. Sometimes, a job can be stuck on one of the grid nodes and after hours, it's still not completed. Its corresponding output-file e.g. out.job32010-aa doesn't get updated as well. Was wondering whether I could get any feedback to see what's slowing things down, or why the job gets stuck. I'm using grid version < 6.0, so I used the old-sge option. I've also tried with/without free_mem=0.5G ; but doesn't seem to make much of a difference. Best regards, Yee Seng.
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