Hi all, Does the query size of mpiblast effect the total performance?
It took about 17 seconds per sequence when I run 721 sequences (542K) against 22G database. But when I run 88532 sequences (47M) against the same database, it took about 1 minute.
Can the performance be improved if the query sequence is in a relatively smaller size?
Thank you for your kind comments and suggestions. Chuming Chen
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