Hi P. Lee,
Actually, as you mentioned, RAWdump.exe is a 32-bit program, therefore it does
not make sense to bind to 64-bit version of MSFileReader.
I guess we should add this to the documentation.
Regarding Java3D, have you been able to run any other application using Java3D?
Tomas
On Nov 3, 2011, at 10:07 AM, P. Lee Ferguson wrote:
> Hi, I am a new MZmine user and was just dealing with the issue of Thermo's
> MSFileReader running on a 64 bit Windows XP machine, when I came across the
> recent posts on this topic. So, I thought I'd put in my two cents. Pardon
> me if what I wrote below is common knowledge.
>
> I was able to make it work: my MZmine implementation now reads Thermo .RAW
> files directly, but it wasn't as simple as just registering the libraries.
> The most recent version of the MSFileReader available from Thermo (v2.2,
> available here: http://sjsupport.thermofinnigan.com/public/detail.asp?id=703)
> contains both 32 bit and 64 bit versions of the program. Excellent, right??
> Well I installed the 64 bit version, and unfortunately, I couldn't make it
> work. The .DLL file created by the 64 bit version is called
> "Xrawfile2_64.DLL", so this won't work correctly with the RAWdump.exe program
> within MZmine. I tried editing RAWdump.cpp to account for the new file name
> and then recompiled it into an .exe file, but it still wouldn't work. I
> suspect that either this file is called by some other module within MZmine (I
> don't know enough about programming to hunt this down) or perhaps since the
> RAWdump.exe program is compiled from 32 bit VC++, it is inherently
> incompatible with a 64 bit library. In the end, I simply uninstalled the 64
> bit MSFileReader version, installed the 32 bit version (it gives you the
> choice to do either during installation), and then edited RAWdump.cpp to
> account for the fact that the 32 bit Xrawfile2.dll file now lives in the
> "C:\Program Files (x86)\Thermo\MSFileReader" directory. Compiled and
> replaced the previous version, now it works like a charm. If anyone felt
> like integrating the 64 bit Thermo MSFileReader library; however, it is out
> there and available to use.
>
> What does NOT seem to work on my MZmine implementation is the Java3d
> interface. I installed the amd64 version of Java3d, but somehow the MZmine
> program can't seem to find it. I don't see any place in the startup batch
> file to specify the path to Java3d. Anyone know what I'm doing wrong?
>
>
>
> --
> P. Lee Ferguson, Ph.D.
> Associate Professor
> Department of Civil & Environmental Engineering
> Pratt School of Engineering &
> Nicholas School of the Environment
> Duke University
> 121 Hudson Hall, Box 90287
> Durham, NC 27708-0287
>
> Phone: 919-660-5460
> Fax: 919-660-5219
>
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===============================================
Tomas Pluskal
G0 Cell Unit, Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
TEL: +81-98-966-8684
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