Dear Mzmine developer,
Thank for the quick response to our problems, I appreciate it. The
problems were fixed after installing version 2.4. We have LC-MS machine and
we really like Mzmine2 software, especially the addition of support for
modules written in R. I have more questions.
1) How do I add additional R models that I can use in Zmine2.4? I would
like to use R packages such as pie chart, partial least squares regression,
support vector machines, ANOVA etc.
2) Is it possible to add Peak Asymmetry calculations to MZmine2.4 so that
we users may use it to filter their data?
I look forward to hearing from you.
Sincerely,
Stephen Opiyo
On Tue, Nov 22, 2011 at 10:33 PM, Tomas Pluskal <plus...@oist.jp> wrote:
> Hi Stephen,
>
> Please try again with version 2.4, the batch mode should be fixed.
>
> Regarding heat maps, you need to have R installed and edit the startMZmine
> script as described in the manual.
>
> Best regards,
>
> Tomas
>
>
>
> On Nov 23, 2011, at 10:57 AM, Pudney Chris (ext) GBJH wrote:
>
> G'day,
>
> 1) The batch mode does not work well. Process only one batch and stops.
>
> 3) Does not save Batch configuration
>
>
> Stephen, I've made some changes to the Batch Queue code that address
> both of these problems. The fixes should be available in the next
> release of MZmine.
>
> Regards,
> Chris.
>
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>
>
>
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-novd2d
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>
> ===============================================
> Tomas Pluskal
> G0 Cell Unit, Okinawa Institute of Science and Technology Graduate
> University
> 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
> TEL: +81-98-966-8684
>
>
--
Stephen Opiyo
Research Scientist and Manager KH-TPS core facility
Molecular and Cellular Imaging Center (MCIC) - South
The Ohio State University
Office: 475B Kottman Hall
Lab: 470 Kottman Hall
Columbus OH, 43210 (USA)
Email: opiy...@osu.edu
Tel: 614-292-7717; Lab Tel: 614-688-5395
Webpage: kh-tps.osu.edu
------------------------------------------------------------------------------
All the data continuously generated in your IT infrastructure
contains a definitive record of customers, application performance,
security threats, fraudulent activity, and more. Splunk takes this
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
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