Hello Tomas,
Thank you
Raghavendra Gunnaiah
Ph.D Scholar
R1-013,Department of Plant Science
McGill University Macdonald Campus
21,111 Lakeshore Road
Ste. Anne de Bellevue, QC H9X 3V9
________________________________
From: Tomas Pluskal [plus...@oist.jp]
Sent: December 18, 2012 12:40 AM
To: Developer discussion
Cc: Raghavendra Gunnaiah
Subject: Re: [Mzmine-devel] Gap filling
Hi Raghavendra,
Sorry, the gap fillers don't have such option.
Personally, I prefer to see a small noise-level value rather than zero, because
zeroes cause troubles later during analysis (impossible to plot on log-scale,
impossible to calculate fold-change etc).
Cheers,
Tomas
On Dec 14, 2012, at 2:18 AM, Raghavendra Gunnaiah
<raghavendra.gunna...@mail.mcgill.ca<mailto:raghavendra.gunna...@mail.mcgill.ca>>
wrote:
Dear Developers and Users,
When I use Gap filling, I find that it fills at the noise level for many of the
peaks. I tried both Peak finder (I tried intensity tolerance from 10-70%) and
Same m/z and RT range gap filler. But it doesn't helps.
Is there any way to gap fill only above noise level
regards
Raghavendra Gunnaiah
Ph.D. scholar
Department of Plant Science
McGill Univerisity, Canada
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Tomas Pluskal
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1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
WWW: https://groups.oist.jp/g0
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