Hello Steen, I believe this has been already fixed in the current source codes, but at the moment there is nobody with enough time to prepare a new MZmine release. I should be able to get back to MZmine development in September.
Best regards, Tomas On Jun 24, 2014, at 15:43, SEEB (Steen Buskov) <s...@novozymes.com> wrote: > Hi > I just realized that I am not able to export charge state. This seems to be > impossible to include in the export selection window – would it be easy to > implement that ? > > Best Regards > Steen Buskov > Manager > > Novozymes A/S > Hallas Alle 1 > 4400 Kalundborg Denmark > Phone: +45 44466071 > Mobile: +45 30776071 > Fax: +4544461000 > E-mail: s...@novozymes.com > Web: www.novozymes.com > > Follow Novozymes on: LinkedIn | Twitter > > > Novozymes A/S (reg. no.:10007127). Registered address: Krogshoejvej 36 > DK-2880 Bagsvaerd, Denmark > This e-mail (including any attachments) is for the intended addressee(s) only > and may contain confidential and/or proprietary information protected by law. > You are hereby notified that any unauthorized reading, disclosure, copying or > distribution of this e-mail or use of information herein is strictly > prohibited. If you are not an intended recipient you should delete this > e-mail immediately. Thank you. > > From: SEEB (Steen Buskov) > Sent: 24 June 2014 08:13 > To: 'Tomas Pluskal'; Developer discussion > Subject: RE: Question > > Hi > Thanks > I am no expert in developing Java modules so I cant do it L > > But what I am doing right now is just expanding the adducts list with double > and triply charged adducts – then it can search for these. > > However it would by very nice if mzmine has a feature to calculate m from > charge state and m/z and then allow that value either to be searched in > databases or exported. If the adducts module could search this value instead > of m/z, then the issue would be solved J > > Best Regards > Steen Buskov > Manager > > Novozymes A/S > Hallas Alle 1 > 4400 Kalundborg Denmark > Phone: +45 44466071 > Mobile: +45 30776071 > Fax: +4544461000 > E-mail: s...@novozymes.com > Web: www.novozymes.com > > Follow Novozymes on: LinkedIn | Twitter > > > Novozymes A/S (reg. no.:10007127). Registered address: Krogshoejvej 36 > DK-2880 Bagsvaerd, Denmark > This e-mail (including any attachments) is for the intended addressee(s) only > and may contain confidential and/or proprietary information protected by law. > You are hereby notified that any unauthorized reading, disclosure, copying or > distribution of this e-mail or use of information herein is strictly > prohibited. If you are not an intended recipient you should delete this > e-mail immediately. Thank you. > > From: Tomas Pluskal [mailto:plus...@oist.jp] > Sent: 24 June 2014 05:27 > To: Developer discussion > Cc: SEEB (Steen Buskov) > Subject: RE: Question > > Dear Steen, > > I believe your observations are correct. > The calculations of M from m/z is quite trivial, so it can be easily done > e.g. in Excel. > For the detection of adducts, someone has to improve the MZmine module. > > Best regards, > > Tomas > > > From: SEEB (Steen Buskov) [s...@novozymes.com] > Sent: Monday, June 23, 2014 10:11 PM > To: mzmine-devel@lists.sourceforge.net > Subject: [Mzmine-devel] Question > > Hi > I am currently trying to use and optimize the MZmine for peptide hugh res MS > data processing and would like to generate a peak list with calculated M from > m/z and charge state. > Is that possible ? > Furthermore it seems like it is not possible to search for adducts when the > compound is present in charge +2 or more ? > Is that correct ? > > Thanks for an excellent programme > > Best Regards > Steen Buskov > Manager > > Novozymes A/S > Hallas Alle 1 > 4400 Kalundborg Denmark > Phone: +45 44466071 > Mobile: +45 30776071 > Fax: +4544461000 > E-mail: s...@novozymes.com > Web: www.novozymes.com > > Follow Novozymes on: LinkedIn | Twitter > > > Novozymes A/S (reg. no.:10007127). Registered address: Krogshoejvej 36 > DK-2880 Bagsvaerd, Denmark > This e-mail (including any attachments) is for the intended addressee(s) only > and may contain confidential and/or proprietary information protected by law. > You are hereby notified that any unauthorized reading, disclosure, copying or > distribution of this e-mail or use of information herein is strictly > prohibited. If you are not an intended recipient you should delete this > e-mail immediately. Thank you. > =============================================== Tomas Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890 ------------------------------------------------------------------------------ Open source business process management suite built on Java and Eclipse Turn processes into business applications with Bonita BPM Community Edition Quickly connect people, data, and systems into organized workflows Winner of BOSSIE, CODIE, OW2 and Gartner awards http://p.sf.net/sfu/Bonitasoft _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel
