Hi Thomas, I think instead of adding the row manually to the tree model, you should just let the tree model know that the peak list structure has changed, by calling
treeModel.notifyObjectChanged(peakList, true); That should result in updating the peak list rows in the tree. Cheers, Tomas On Oct 30, 2014, at 19:05, TFRD (Thomas Franck Dyrlund) <t...@steno.dk<mailto:t...@steno.dk>> wrote: Hi everyone I need your help to fix a bug in MZmine. The problem is that after adding a new peak to the peak list table, it is not shown in the tree if the peak list is expanded in the main window. When a user then deletes this row, an error is returned in SimplePeakList.java l. 246. Based on what I can see, the problem is that the project tree model is not updated after adding the row in SimplePeakList.java: public void addRow(PeakListRow row) { List<RawDataFile> myFiles = Arrays.asList(this.getRawDataFiles()); for (RawDataFile testFile : row.getRawDataFiles()) { if (!myFiles.contains(testFile)) throw (new IllegalArgumentException("Data file " + testFile+ " is not in this peak list")); } peakListRows.add(row); ... } Deleting a non-user added row works fine and I have therefore tried adding the following to addRow(): // We have to update the project tree model MZmineProjectImpl project = (MZmineProjectImpl) MZmineCore.getCurrentProject(); PeakListTreeModel treeModel = project.getPeakListTreeModel(); treeModel.addObject(row); However, I get the following error when loading a project and also a new row is not added to the peak list tree: java.lang.IllegalStateException: This method must be called from Swing thread Can anyone please help solve this bug? Best regards, Thomas ------------------------------------------------------------------------------ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net<mailto:Mzmine-devel@lists.sourceforge.net> https://lists.sourceforge.net/lists/listinfo/mzmine-devel =============================================== Tomas Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890
------------------------------------------------------------------------------
_______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel
