Dear Tomas,
Could you please send me a modified version of MZmine 2.13 so that i can
try to run with current data set. Thanks.
2014-12-08 8:32 GMT+08:00 Tomas Pluskal <plus...@oist.jp>:
> Hi YS,
>
> The problem is that your file contains empty <precursorMz> tags, such as
> this:
>
> <precursorMz precursorIntensity="0"
> activationMethod="HCD"></precursorMz>
>
> I am not sure why this happens, because I think the information about
> the precursor (m/z and intensity) should be retained in your raw data.
> Nevertheless, I modified the mzXML import function in MZmine to handle
> this case, so you will be able to load such file into future MZmine
> versions (2.13 or later).
>
> Best regards,
>
> Tomas
>
>
>
> On Dec 5, 2014, at 19:28, YS LING <ling8...@gmail.com> wrote:
>
> Dear Mzmine developer,
>
> I encountered the problem as above. I acquired the data using Agilent QqQ
> with the mode Precursor Ion scan. I convert the data into mzXML but MZmine
> 2.12 gave me the task error as above. Could you please give me some advice
> on it?
>
> The data is quite huge and here is the link
> https://www.hightail.com/download/UlRTRm80WlRWRCtGa2NUQw
>
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> ===============================================
> Tomas Pluskal
> G0 Cell Unit, Okinawa Institute of Science and Technology Graduate
> University
> 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
> WWW: https://groups.oist.jp/g0
> TEL: +81-98-966-8684
> Fax: +81-98-966-2890
>
>
--
Yee-Soon LING
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