Can you share the messages.log from your graphdb directory?

And potentially the Gephi logfile too

Michael

Am 11.06.2014 um 05:07 schrieb Nipun Agarwal <[email protected]>:

> Hi,
> 
> I am seeing the same problem. I had my database created by neo4j version 
> 2.0.3. It was working perfectly fine.
> I installed Gephi which was unable to load my database. After that I am 
> unable to start my neo4j using that database.
> Were you able to resolve your issue?
> 
> On Tuesday, May 6, 2014 12:06:00 AM UTC+5:30, Jean-Baptiste Gllpn wrote:
> Thanks! I was using Gephi 0.8.1. As it wasn't working I updated to 0.8.2, but 
> that version of Gephi just fails to load at all on my computer... Best, JBG
> 
> 
> 
> On Thu, May 1, 2014 at 8:18 AM, Michael Hunger <[email protected]> 
> wrote:
> Which version of gephi and the gephi plugin did you use?
> 
> 
> Am 19.04.2014 um 21:07 schrieb Jean-Baptiste Gallopin <[email protected]>:
> 
>> Thank you Lundin for your help. I just posted on that thread. In the 
>> meantime, I've restored my recent backup so it's less of a headache! I'll 
>> stay away from Gephi for now.
>> 
>> Best, JB
>> 
>> 
>> On Sat, Apr 19, 2014 at 2:49 PM, Lundin <[email protected]> wrote:
>> No I am sorry i am not familiar with the plugin or what it does the store 
>> with various Neo4j versions. Seems to exists github issues ongoing
>> https://github.com/gephi/gephi-plugins/issues/40
>> 
>> Something happend indeed. 
>> Den lördagen den 19:e april 2014 kl. 20:21:15 UTC+2 skrev Jean-Baptiste 
>> Gllpn:
>> 
>> 
>> Hello,
>> 
>> thanks for your response.
>> 
>> I created the database in the Neo4j instance I'm running, and I only have 
>> one version.
>> 
>> I suspect the problem may come from the fact that yesterday I attempted to 
>> load my database into Gephi using the Gephi plugin. Gephi failed to import 
>> the database, so I uncommented the allow_store_upgrade=true line in the 
>> neo4j.properties file. It still failed to load, so I put the # back again, 
>> but I'm wondering whether the Neo4j import plugin in Gephi might have messed 
>> with my database. Any suggestions on how to fix this?
>> 
>> Thanks again.
>> 
>> Jean-Baptiste.
>> 
>> 
>> On Sat, Apr 19, 2014 at 2:10 PM, Lundin <[email protected]> wrote:
>> Hi,
>> 
>> This store/graph.db is from the same Neo4j version ?
>> 
>> 
>> Mismatching store version found (v0.A.2 while expecting v0.A.1).
>> 
>> Seems to indicate that your current store was created in a newer 2.0.2 
>> version while you are running .0.1, do you have multiple version ? Try with 
>> 0.2 version.
>> 
>> Den lördagen den 19:e april 2014 kl. 19:07:47 UTC+2 skrev Jean-Baptiste 
>> Gllpn:
>> Hello,
>> 
>> I was using Neo4j without a problem but my server is now failing to start. 
>> The error log is a bit cryptic to me. Any idea as to how I could fix this?
>> 
>> Many thanks in advance for your help.
>> 
>> Jean-Baptiste.
>> 
>> avr. 19, 2014 1:03:30 PM org.neo4j.server.logging.Logger log
>> Infos: Setting startup timeout to: 120000ms based on -1
>> avr. 19, 2014 1:03:31 PM org.neo4j.server.logging.Logger log
>> Grave: 
>> org.neo4j.server.ServerStartupException: Starting Neo4j Server failed: Error 
>> starting org.neo4j.kernel.EmbeddedGraphDatabase, 
>> /usr/local/Cellar/neo4j/2.0.1/libexec/data/graph.db
>>     at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:218)
>>     at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:87)
>>     at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:50)
>> Caused by: java.lang.RuntimeException: Error starting 
>> org.neo4j.kernel.EmbeddedGraphDatabase, 
>> /usr/local/Cellar/neo4j/2.0.1/libexec/data/graph.db
>>     at 
>> org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:330)
>>     at 
>> org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:63)
>>     at 
>> org.neo4j.graphdb.factory.GraphDatabaseFactory$1.newDatabase(GraphDatabaseFactory.java:92)
>>     at 
>> org.neo4j.graphdb.factory.GraphDatabaseBuilder.newGraphDatabase(GraphDatabaseBuilder.java:198)
>>     at 
>> org.neo4j.kernel.impl.recovery.StoreRecoverer.recover(StoreRecoverer.java:115)
>>     at 
>> org.neo4j.server.preflight.PerformRecoveryIfNecessary.run(PerformRecoveryIfNecessary.java:59)
>>     at org.neo4j.server.preflight.PreFlightTasks.run(PreFlightTasks.java:70)
>>     at 
>> org.neo4j.server.AbstractNeoServer.runPreflightTasks(AbstractNeoServer.java:333)
>>     at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:152)
>>     ... 2 more
>> Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 
>> 'org.neo4j.kernel.impl.transaction.XaDataSourceManager@4b29670c' was 
>> successfully initialized, but failed to start. Please see attached cause 
>> exception.
>>     at 
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:509)
>>     at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
>>     at 
>> org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:307)
>>     ... 10 more
>> Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 
>> 'org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource@24a11405' was 
>> successfully initialized, but failed to start. Please see attached cause 
>> exception.
>>     at 
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:509)
>>     at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115)
>>     at 
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.start(XaDataSourceManager.java:164)
>>     at 
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:503)
>>     ... 12 more
>> Caused by: java.lang.IllegalStateException: Mismatching store version found 
>> (v0.A.2 while expecting v0.A.1). The store cannot be automatically upgraded 
>> since it isn't cleanly shutdown. Recover by starting the database using the 
>> previous Neo4j version, followed by a clean shutdown. Then start with this 
>> version again.
>>     at 
>> org.neo4j.kernel.impl.nioneo.store.NeoStore.checkVersion(NeoStore.java:165)
>>     at 
>> org.neo4j.kernel.impl.nioneo.store.CommonAbstractStore.<init>(CommonAbstractStore.java:110)
>>     at 
>> org.neo4j.kernel.impl.nioneo.store.AbstractStore.<init>(AbstractStore.java:81)
>>     at org.neo4j.kernel.impl.nioneo.store.NeoStore.<init>(NeoStore.java:100)
>>     at 
>> org.neo4j.kernel.impl.nioneo.store.StoreFactory.attemptNewNeoStore(StoreFactory.java:131)
>>     at 
>> org.neo4j.kernel.impl.nioneo.store.StoreFactory.newNeoStore(StoreFactory.java:115)
>>     at 
>> org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource.start(NeoStoreXaDataSource.java:323)
>>     at 
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:503)
>>     ... 15 more
>> 
>> avr. 19, 2014 1:03:31 PM org.neo4j.server.logging.Logger log
>> Grave: Failed to start Neo Server on port [7474]
>> 
>> 
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