Thanks Michael removing the graph.db/index/lucene.log.* helped and I am
able to access few of APIs. So I think we are good with upgrade.
Some complains for older version of cypher that uses "?".
"and you _might_ need to create a transaction against an index, like
creating
an index and deleting it again, e.g. from java code or the shell.
db.index().forNodex("foo").delete()"
Do I still need to do this? Wouldn't this clear all the indexes that we
have for all the different type of nodes? say "foo" and "bar".
Regards,
Mamta.
On Tuesday, June 17, 2014 8:51:36 PM UTC+5:30, Michael Hunger wrote:
>
> No, as you have a clean shutdown all the data is in the store.
>
> Sent from mobile device
>
> Am 17.06.2014 um 16:55 schrieb Mamta Thakur <ghazal...@gmail.com
> <javascript:>>:
>
> Hi Michael,
>
> Does that mean I will loose the existing index as well? How would any of
> my queries work?
>
> I fixed some of the @RelationshipEntity that did not have an @GraphId
> required with 2.0.3.
> Now I don't get this error on start up rather I get this error when
> shutting down the server.
>
> ~Mamta.
>
> On Tuesday, June 17, 2014 7:36:10 PM UTC+5:30, Michael Hunger wrote:
>>
>> Btw. just got the info that it is fixed and will be part of 2.0.4
>>
>> https://github.com/neo4j/neo4j/commit/37371aa (Thanks Jake!)
>>
>> Michael
>> Am 17.06.2014 um 14:55 schrieb Michael Hunger <
>> michael...@neotechnology.com>:
>>
>> This is a know issue which is currently worked on,
>>
>> can you delete the logical log files of the lucene index after your
>> upgrade?
>>
>> that means
>>
>> rm graph.db/index/lucene.log.*
>>
>> and you _might_ need to create a transaction against an index, like
>> creating
>> an index and deleting it again, e.g. from java code or the shell.
>>
>> db.index().forNodex("foo").delete()
>>
>>
>>
>> Thanks a lot
>>
>> Michael
>>
>> Am 17.06.2014 um 09:59 schrieb Mamta Thakur <ghazal...@gmail.com>:
>>
>> Hi,
>>
>> I have been trying to upgrade neo4j from 1.9.3 to 2.0.3. SDN
>> from 2.3.1.RELEASE to 3.1.0.RELEASE.
>>
>> Followed the steps listed @
>> http://docs.neo4j.org/chunked/stable/deployment-upgrading.html#explicit-upgrade
>> I try bringing up the server with the upgrade configuration.There are a
>> few new folders created in the db store. One among which is upgrade_backup
>> and messages log there says upgrade happened.
>>
>> 2014-06-17 07:16:55.286+0000 INFO [o.n.k.i.DiagnosticsManager]: ---
>> INITIALIZED diagnostics END ---
>> 2014-06-17 07:17:00.216+0000 INFO [o.n.k.i.n.s.StoreFactory]: Starting
>> upgrade of database store files
>> 2014-06-17 07:17:00.225+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 10% complete
>> 2014-06-17 07:17:00.228+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 20% complete
>> 2014-06-17 07:17:00.231+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 30% complete
>> 2014-06-17 07:17:00.233+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 40% complete
>> 2014-06-17 07:17:00.236+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 50% complete
>> 2014-06-17 07:17:00.239+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 60% complete
>> 2014-06-17 07:17:00.241+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 70% complete
>> 2014-06-17 07:17:00.244+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 80% complete
>> 2014-06-17 07:17:00.247+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 90% complete
>> 2014-06-17 07:17:00.249+0000 INFO [o.n.k.i.n.s.StoreFactory]: Store
>> upgrade 100% complete
>> 2014-06-17 07:17:03.776+0000 INFO [o.n.k.i.n.s.StoreFactory]: Finished
>> upgrade of database store files
>>
>> But I get the error with log/index.
>>
>> Exception when stopping
>> org.neo4j.index.impl.lucene.LuceneDataSource@42a792f0
>> org.neo4j.kernel.impl.tran
>> saction.xaframework.IllegalLogFormatException: Invalid log format version
>> found, expected 3 but was 2. To be able to upgrade from an older log format
>> version there must have been a clean shutdown of the database
>> java.lang.RuntimeException:
>> org.neo4j.kernel.impl.transaction.xaframework.IllegalLogFormatException:
>> Invalid log format version found, expected 3 but wa
>> s 2. To be able to upgrade from an older log format version there must
>> have been a clean shutdown of the database
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$TransactionTimeSpanPruneStrategy$1.reached(LogPruneStrategies.java:250)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$AbstractPruneStrategy.prune(LogPruneStrategies.java:78)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$TransactionTimeSpanPruneStrategy.prune(LogPruneStrategies.java:222)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.close(XaLogicalLog.java:742)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogBackedXaDataSource.stop(LogBackedXaDataSource.java:69)
>> at
>> org.neo4j.index.impl.lucene.LuceneDataSource.stop(LuceneDataSource.java:310)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.shutdown(LifeSupport.java:547)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.remove(LifeSupport.java:339)
>> at
>> org.neo4j.kernel.impl.transaction.XaDataSourceManager.unregisterDataSource(XaDataSourceManager.java:272)
>> at
>> org.neo4j.index.lucene.LuceneKernelExtension.stop(LuceneKernelExtension.java:92)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.extension.KernelExtensions.stop(KernelExtensions.java:124)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155)
>> at
>> org.neo4j.kernel.lifecycle.LifeSupport.shutdown(LifeSupport.java:185)
>> at
>> org.neo4j.kernel.InternalAbstractGraphDatabase.shutdown(InternalAbstractGraphDatabase.java:801)
>> at
>> org.springframework.data.neo4j.support.DelegatingGraphDatabase.shutdown(DelegatingGraphDatabase.java:270)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>> at java.lang.reflect.Method.invoke(Unknown Source)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.invokeCustomDestroyMethod(DisposableBeanAdapter.java:327)
>> at
>> org.springframework.beans.factory.support.DisposableBeanAdapter.destroy(DisposableBeanAdapter.java:253)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:510)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:486)
>> at
>> org.springframework.beans.factory.support.DefaultListableBeanFactory.destroySingleton(DefaultListableBeanFactory.java:742)
>> at
>> org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:455)
>> at
>> org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:1090)
>> at
>> org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:487)
>> at
>> org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:389)
>> at
>> org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:294)
>> at
>> org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:112)
>> at
>> org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4206)
>> at
>> org.apache.catalina.core.StandardContext.start(StandardContext.java:4705)
>> at
>> org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:799)
>> at
>> org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:779)
>> at
>> org.apache.catalina.core.StandardHost.addChild(StandardHost.java:601)
>> at
>> org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:943)
>> at
>> org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:778)
>> at
>> org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:504)
>> at
>> org.apache.catalina.startup.HostConfig.start(HostConfig.java:1317)
>> at
>> org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:324)
>> at
>> org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)
>> at
>> org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1065)
>> at
>> org.apache.catalina.core.StandardHost.start(StandardHost.java:840)
>> at
>> org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
>> at
>> org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
>> at
>> org.apache.catalina.core.StandardService.start(StandardService.java:525)
>> at
>> org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
>> at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>> at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>> at java.lang.reflect.Method.invoke(Unknown Source)
>> at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
>> at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
>> Caused by:
>> org.neo4j.kernel.impl.transaction.xaframework.IllegalLogFormatException:
>> Invalid log format version found, expected 3 but was 2. To be able t
>> o upgrade from an older log format version there must have been a clean
>> shutdown of the database
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogIoUtils.readLogHeader(LogIoUtils.java:70)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.XaLogicalLog.getFirstStartRecordTimestamp(XaLogicalLog.java:1704)
>> at
>> org.neo4j.kernel.impl.transaction.xaframework.LogPruneStrategies$TransactionTimeSpanPruneStrategy$1.reached(LogPruneStrategies.java:246)
>> ... 57 more
>>
>> Does anyone have any idea on how to fix this? Also tried upgrading to the
>> latest version(2.1.2) but results with the same error.
>>
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