Did you have a previous database there? Can you check the filesystem permissions?
On Thu, Nov 27, 2014 at 3:17 AM, Narendran Thangarajan <[email protected]> wrote: > Hi all, > > I downloaded the latest version of neo4j database (unix variant) on my > ubuntu machine. I set my ulimit to 40000 as suggested in the documentation. > When I execute './neo4j start' from the bin folder, I get the following > exception in data/graph.db/messages.log. And the server doesn't start. > Could you please help me solve this issue? > > Please let me know if you need more details. > > *Stack Trace :* > 2014-11-27 02:11:43.344+0000 INFO [o.n.k.i.t.TxManager]: TM new log: > tm_tx_log.1 > 2014-11-27 02:11:43.424+0000 INFO [o.n.k.i.t.KernelHealth]: Kernel health > set to OK > 2014-11-27 02:13:50.869+0000 ERROR [o.n.k.i.t.XaDataSourceManager]: Failed > when notifying registering listener > org.neo4j.kernel.impl.nioneo.store.UnderlyingStorageException: Unable to > load position[1] @[9] > at > org.neo4j.kernel.impl.nioneo.store.PersistenceRow.readFullWindow(PersistenceRow.java:162) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.PersistenceRow$State$1.transition(PersistenceRow.java:114) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.PersistenceRow.lock(PersistenceRow.java:58) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.PersistenceWindowPool.acquire(PersistenceWindowPool.java:197) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.CommonAbstractStore.acquireWindow(CommonAbstractStore.java:546) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.NeoStore.getRecord(NeoStore.java:553) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.NeoStore.getRandomNumber(NeoStore.java:434) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource.getRandomIdentifier(NeoStoreXaDataSource.java:654) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.ext.udc.impl.DefaultUdcInformationCollector$1.registeredDataSource(DefaultUdcInformationCollector.java:100) > ~[neo4j-udc-2.1.5.jar:na] > at > org.neo4j.kernel.impl.transaction.XaDataSourceManager.addDataSourceRegistrationListener(XaDataSourceManager.java:128) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.ext.udc.impl.DefaultUdcInformationCollector.<init>(DefaultUdcInformationCollector.java:92) > [neo4j-udc-2.1.5.jar:na] > at > org.neo4j.ext.udc.impl.UdcKernelExtension.start(UdcKernelExtension.java:72) > [neo4j-udc-2.1.5.jar:na] > at > org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507) > [neo4j-kernel-2.1.5.jar:2.1.5] > at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.extension.KernelExtensions.start(KernelExtensions.java:119) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:507) > [neo4j-kernel-2.1.5.jar:2.1.5] > at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:115) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:343) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:59) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.server.database.LifecycleManagingDatabase$1.newGraphDatabase(LifecycleManagingDatabase.java:45) > [neo4j-server-2.1.5.jar:2.1.5] > at > org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:119) > [neo4j-server-2.1.5.jar:2.1.5] > at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:167) > [neo4j-server-2.1.5.jar:2.1.5] > at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:108) > [neo4j-server-2.1.5.jar:2.1.5] > at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:62) > [neo4j-server-2.1.5.jar:2.1.5] > Caused by: java.nio.channels.ClosedByInterruptException: null > at > java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:202) > ~[na:1.7.0_65] > at sun.nio.ch.FileChannelImpl.readInternal(FileChannelImpl.java:706) > ~[na:1.7.0_65] > at sun.nio.ch.FileChannelImpl.read(FileChannelImpl.java:685) ~[na:1.7.0_65] > at > org.neo4j.kernel.impl.nioneo.store.StoreFileChannel.read(StoreFileChannel.java:112) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.PersistenceRow.readFullWindow(PersistenceRow.java:157) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > ... 23 common frames omitted > 2014-11-27 02:13:50.902+0000 ERROR [o.n.k.i.t.TxManager]: Unable to close > tx > log[/home/pircnet/software/unix-neo4j/neo4j-community-2.1.5/data/graph.db/tm_tx_log.1] > java.nio.channels.ClosedByInterruptException: null > at > java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:202) > ~[na:1.7.0_65] > at sun.nio.ch.FileChannelImpl.writeInternal(FileChannelImpl.java:744) > ~[na:1.7.0_65] > at sun.nio.ch.FileChannelImpl.write(FileChannelImpl.java:724) > ~[na:1.7.0_65] > at > org.neo4j.kernel.impl.nioneo.store.StoreFileChannel.write(StoreFileChannel.java:51) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.nioneo.store.StoreFileChannel.writeAll(StoreFileChannel.java:72) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.writeOut(DirectMappedLogBuffer.java:162) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.transaction.xaframework.DirectMappedLogBuffer.force(DirectMappedLogBuffer.java:171) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at org.neo4j.kernel.impl.transaction.TxLog.close(TxLog.java:166) > ~[neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.impl.transaction.TxManager.closeLog(TxManager.java:276) > [neo4j-kernel-2.1.5.jar:2.1.5] > at org.neo4j.kernel.impl.transaction.TxManager.stop(TxManager.java:233) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.stop(LifeSupport.java:527) > [neo4j-kernel-2.1.5.jar:2.1.5] > at org.neo4j.kernel.lifecycle.LifeSupport.stop(LifeSupport.java:155) > [neo4j-kernel-2.1.5.jar:2.1.5] > at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:123) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.InternalAbstractGraphDatabase.run(InternalAbstractGraphDatabase.java:343) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.kernel.EmbeddedGraphDatabase.<init>(EmbeddedGraphDatabase.java:59) > [neo4j-kernel-2.1.5.jar:2.1.5] > at > org.neo4j.server.database.LifecycleManagingDatabase$1.newGraphDatabase(LifecycleManagingDatabase.java:45) > [neo4j-server-2.1.5.jar:2.1.5] > at > org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:119) > [neo4j-server-2.1.5.jar:2.1.5] > at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:167) > [neo4j-server-2.1.5.jar:2.1.5] > at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:108) > [neo4j-server-2.1.5.jar:2.1.5] > at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:62) > [neo4j-server-2.1.5.jar:2.1.5] > 2014-11-27 02:13:50.903+0000 INFO [o.n.k.i.t.TxManager]: TM shutting down > 2014-11-27 02:13:50.908+0000 INFO [o.n.k.i.DiagnosticsManager]: --- > STOPPING diagnostics START --- > 2014-11-27 02:13:50.908+0000 INFO [o.n.k.i.DiagnosticsManager]: --- > STOPPING diagnostics END --- > 2014-11-27 02:13:50.913+0000 ERROR [o.n.k.EmbeddedGraphDatabase]: Startup > failed: Component > 'org.neo4j.kernel.impl.transaction.XaDataSourceManager@4b9e8b55' failed > to stop. Please see attached cause exception.: Component > 'org.neo4j.kernel.impl.nioneo.xa.NeoStoreXaDataSource@244b9168' failed to > stop. Please see attached cause exception.: > java.nio.channels.ClosedByInterruptException: null: Component > 'org.neo4j.kernel.extension.KernelExtensions@5f594a5f' was successfully > initialized, but failed to start. Please see attached cause exception.: > Component 'org.neo4j.index.lucene.LuceneKernelExtension@295ebdbf' was > successfully initialized, but failed to start. Please see attached cause > exception.: Component 'org.neo4j.index.impl.lucene.LuceneDataSource@129ba8ac' > was successfully initialized, but failed to start. Please see attached > cause exception.: java.nio.channels.ClosedByInterruptException: null > > Thanks, > Narendran > > -- > You received this message because you are subscribed to the Google Groups > "Neo4j" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "Neo4j" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. For more options, visit https://groups.google.com/d/optout.
