> Am 31.03.2015 um 23:14 schrieb Josef Karthauser <[email protected]>:
> 
> It is strange isn't it. I am using an embedded database.
> 
> I removed all the bad spatial linkages, and then checked to see that all of 
> my domain objects were otherwise indexed correctly, and they were. So we have 
> to explain how these self referencing nodes happened.
> 
> The only story that makes sense to me, and granted I don't know how the 
> transaction code works so it might be impossible, is that the domain objects 
> got rolled back when the database crashed, but the spatial index nodes didn't.
> 
> I can try again with a fresh database and see whether it's reproducible 
> easily enough. I'll try and do that tomorrow and report back.

That would be great, thanks so much !

Michael

> 
> Cheers,
> Joe
> 
> On Tuesday, March 31, 2015 at 2:13:59 PM UTC+1, Michael Hunger wrote:
> The index links to the domain nodes via the id-property.
> 
> This is weird as both should happen in the same transaction at least in 
> embedded.
> 
> Do you think you can reproduce that issue?
> 
> Michael
> 
>> Am 31.03.2015 um 12:16 schrieb Dr Josef Karthauser <joe.kar...@ 
>> <>wansdyketele. <http://wansdyketele.com/>com <http://wansdyketele.com/>>:
>> 
>> On 31 Mar 2015, at 08:33, Dr Josef Karthauser <joe.kar...@ <>wansdyketele. 
>> <http://wansdyketele.com/>com <http://wansdyketele.com/>> wrote:
>>> 
>>> [cut]
>>> I can only assume that something like the following happened. In the lead 
>>> up to an ‘out of file handles crash’ a spatially indexed node was added to 
>>> the database with id 874121, and then added to the spatial index. During 
>>> the crash, restart, transaction unwind node 874121 was wound back, but the 
>>> spatial node referencing it was not. Then, during the next run a new node 
>>> with id 874121 was created, but this was an index node, not a data node.
>>> 
>>> That sounds crazy, but plausible. But, if true suggests then the 
>>> transaction protection isn’t absolute. Running out of file handles is a 
>>> likely outcome and transactions should protect against corruption in this 
>>> scenario, right? Why isn’t the spatial index also getting wound back after 
>>> a transaction failure?
>>> 
>>> This is with neo4j-2.1.6 and neo4j-spatial 0.13
>>> 
>> 
>> This is the extent of the problem:
>> 
>> match (:ReferenceNode)--(m {layer: "topography"})
>> match m-[*]->(n) where has(n.id <http://n.id/>)
>> with n as referencing
>> match q<-[*]-(m) where id(q) = referencing.id <http://referencing.id/>
>> return count(q)
>> 
>> count(q)
>> 114
>>  <>
>> Returned 1 row in 1285 ms
>> That looks like 114 cross links within the index to me.
>> 
>> Is my interpretation right? I’m minded to just delete all of these 
>> ‘referencing’ nodes, and hopefully that will fix the index.
>> 
>> Joe
>> 
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