Okay, when I set strong cache_type, my RAM > pagecache.mem(35g)  > total 
disk store size: nodes,rels, properties(32g),

It won't trigger the GC, right?


On Thursday, September 17, 2015 at 8:10:01 AM UTC+8, Michael Hunger wrote:
>
> also cache-type strong will hold all nodes and relationships that were 
> ever loaded in memory.
>
> That means you have to have enough memory to hold everything (as java 
> objects).
>
> While that is fast if you have enough memory for all data it will churn 
> memory and cause GC if you RAM is not enough.
>
> I'd probably go for cache_type=weak
>
>
> Michael
>
> Am 17.09.2015 um 01:53 schrieb Singleton Chiu <[email protected] 
> <javascript:>>:
>
> My settings not right, coz server won't start, changed to :
> #wrapper.java.additional=-XX:+UseConcMarkSweepGC
> #wrapper.java.additional=-XX:+CMSClassUnloadingEnabled
> wrapper.java.additional=-XX:+UseG1GC
>
> Server started, I'll go and learn something about the java gc.
>
>
> On Thursday, September 17, 2015 at 7:37:39 AM UTC+8, Singleton Chiu wrote:
>
> My settings right now:
>
>
> wrapper.java.additional=-XX:+UseConcMarkSweepGC
> #wrapper.java.additional=-XX:+CMSClassUnloadingEnabled
> wrapper.java.additional=-XX:+UseG1GC
> wrapper.java.additional=-XX:-OmitStackTraceInFastThrow
> wrapper.java.additional=-XX:hashCode=5
>
>
> # Uncomment the following lines to enable garbage collection logging
> wrapper.java.additional=-Xloggc:data/log/neo4j-gc.log
> wrapper.java.additional=-XX:+PrintGCDetails
> wrapper.java.additional=-XX:+PrintGCDateStamps
> wrapper.java.additional=-XX:+PrintGCApplicationStoppedTime
> wrapper.java.additional=-XX:+PrintPromotionFailure
> wrapper.java.additional=-XX:+PrintTenuringDistribution
>
>
> # Java Heap Size: by default the Java heap size is dynamically
> # calculated based on available system resources.
> # Uncomment these lines to set specific initial and maximum
> # heap size in MB.
> wrapper.java.initmemory=20000
> wrapper.java.maxmemory=20000
>
> dbms.pagecache.memory=35g
> cache_type=strong
> keep_logical_logs=3 days
>
>
> Is there anything wrong with the cache_type or keep_logical_logs setting? 
> I just wanna a great throughput, reduce time out moment, and hope the 
> server recovery from stuck.
>
> Thanks for your time again!
>
> On Wednesday, September 16, 2015 at 9:28:59 PM UTC+8, Michael Hunger wrote:
>
> Set heap to at most 16-24G should be fine,
>
> And switch to G1GC with *-XX:+UseG1GC*
> instead of CMS.
>
> CMS is not so good for larger heaps.
>
> Depending on your store file-sizes (nodes + props + rels) set the 
> pagecache to the sum of values, so in your case 35G
>
> Which edition of Neo4j are you using?
>
> Michael
>
>
>
> Am 16.09.2015 um 15:12 schrieb Singleton Chiu <[email protected]>:
>
> I'm using the community version,
> I have searched about my situation, and turned the gc log on.
> And I found that the REST API got stuck  during the Full GC.
>
> 29184.923: [GC 24510626K->23288671K(24643840K), 0.0907810 secs]
> 29185.932: [GC 24515487K->23310086K(24643840K), 0.1171710 secs]
> 29186.976: [GC 24536867K->23309125K(24643840K), 0.0917860 secs]
> 29187.988: [GC 24535807K->23322112K(24643840K), 0.1089120 secs]
> 29189.018: [GC 24548925K->23333210K(24643840K), 0.1097290 secs]
> 29190.054: [GC 24560025K->23350298K(24643840K), 0.1037740 secs]
> 29204.010: [Full GC 24573732K->23319822K(24643840K), 134.0548940 secs]
> 29338.275: [GC 23363153K(24643840K), 0.1082740 secs]
> 29367.432: [Full GC 24643839K->23328404K(24643840K), 133.3548790 secs]
> 29500.901: [GC 23366365K(24643840K), 0.1045400 secs]
> 29529.261: [Full GC 24643839K->23336254K(24643840K), 134.2712890 secs]
> 29663.733: [GC 23367649K(24643840K), 0.1222970 secs]
> 29691.674: [Full GC 24643839K->23343854K(24643840K), 133.6376480 secs]
> 29825.511: [GC 23369329K(24643840K), 0.1298200 secs]
> 29854.807: [Full GC 24643839K->23351726K(24643840K), 134.3462990 secs]
> 29989.364: [GC 23395476K(24643840K), 0.1952480 secs]
> 30018.853: [Full GC 24643839K->23359633K(24643840K), 133.7108280 secs]
> 30152.764: [GC 23395952K(24643840K), 0.1885450 secs]
> 30181.939: [Full GC
>
> Exactly get stuck at the first Full GC.
>
> I thought my problem is the jvm setting,
>
> There are totally 96 GB mem, and my usage  scenarios are lots of 
> node,property,rel write and read, sometimes run a heavy time consuming 
>  cypher.
>
> I think the heap size is not enough, so I change my setting into: 
>
> wrapper.java.additional=-XX:+UseConcMarkSweepGC
> wrapper.java.additional=-XX:+CMSClassUnloadingEnabled
> wrapper.java.additional=-XX:-OmitStackTraceInFastThrow
> wrapper.java.additional=-XX:hashCode=5
>
> wrapper.java.initmemory=50000
> wrapper.java.maxmemory=50000
>
> dbms.pagecache.memory=30g
>
> Total Store Size 31.88 GiB
>
> Is there a guide to set these settings? 
>
> The server now running for 6 hrs normally, with RES:26g, VIRT:61g 
>
> *If it goes Full GC continuously or REST API get stuck again, *
> *I'll come back to you with the packed info.*
>
>
> Many Thanks!
>
>
> On Wednesday, September 16, 2015 at 8:44:52 AM UTC+8, Michael Hunger wrote:
>
> It should definitely recover
>
> do you run neo4j community or enterprise?
>
> what are your settings?
>
> perhaps you can pack together 
>
> conf/*
> data/log/*
> data/graph.db/messsages.log
>
> for some analytics
>
> it can also be that the heap memory is fully utilized by the 2nd level 
> cache so it tries to make room by clearing memory, which can take a second 
> or two  but then should be back
>
> so what you could also do is to enable gc-logging in neo4j-wrapper.conf 
> and then also send the gc-logs together with the other information.
>
> Am 16.09.2015 um 02:37 schrieb Singleton Chiu <[email protected]>:
>
> Thanks for you quick response,  I have already restart the server, I need 
> to wait the problem situation, coz I can't re-product it.
>
> I have checked the py2neo log:
>
> [2015-09-16 07:27:19] [INFO] [28681:MainThread] [http:310 send()] > GET 
> http://10.181.205.198:8474/db/data/
> [2015-09-16 07:27:37] [INFO] [28681:MainThread] [http:306 send()] ~ 
> Reconnecting (timeout)
>
>
> Normally, it response 200 OK within 1 second.
> Not only this REST API, but all encounter time out for hours, not one 
> moment.
>
> And I'm sure the IP and port are certainly right, coz It have run for long 
> time, and after restart the neo4j server, 
> I get the log:
> [2015-09-16 07:47:16] [INFO] [7557:MainThread] [http:310 send()] > GET 
> http://10.181.205.198:8474/db/data/
> [2015-09-16 07:47:16] [INFO] [7557:MainThread] [http:511 __init__()] < 200 
> OK [785]
>
>
> How's that possible after server running normal for hours (have response 
> millions of read/write REST API normally),
> and suddenly goes time out? and seems not recover to normal...
>
> On Wednesday, September 16, 2015 at 8:22:40 AM UTC+8, Michael Hunger wrote:
>
> Hmm,
>
> 1. first of all you should use the / at the end otherwise you also measure 
> redirect time.
> 2. you should use accept header of application/json
> as you don't want to measure html generation.
>
> Please try that and report back, for me i does
>
> time curl -L http://neo.jexp.de:12474/db/data/ 
> {
>   "extensions" : { },
>   "node" : "http://neo.jexp.de:12474/db/data/node";,
>   "node_index" : "http://neo.jexp.de:12474/db/data/index/node";,
>   "relationship_index" : "
> http://neo.jexp.de:12474/db/data/index/relationship";,
>   "extensions_info" : "http://neo.jexp.de:12474/db/data/ext";,
>   "relationship_types" : "
> http://neo.jexp.de:12474/db/data/relationship/types";,
>   "batch" : "http://neo.jexp.de:12474/db/data/batch";,
>   "cypher" : "http://neo.jexp.de:12474/db/data/cypher";,
>   "indexes" : "http://neo.jexp.de:12474/db/data/schema/index";,
>   "constraints" : "http://neo.jexp.de:12474/db/data/schema/constraint";,
>   "transaction" : "http://neo.jexp.de:12474/db/data/transaction";,
>   "node_labels" : "http://neo.jexp.de:12474/db/data/labels";,
>   "neo4j_version" : "2.3-SNAPSHOT"
> }
> real 0m0.055s
> user 0m0.004s
> sys 0m0.004s
>
>
> Am 16.09.2015 um 02:12 schrieb Singleton Chiu <[email protected]>:
>
> Just Now, I encounter the same situation, here's the more specific info, 
> I would very much appreciate for your  time.
>
> neo4j v2.2.3 java1.7 on linux 64bit 96GB mem
>
> node nums
> Node ID 9058830
> Property ID 80189638
> Relationship ID 37459428
>
>
> config:
> org.neo4j.server.webserver.address=0.0.0.0 
> org.neo4j.server.webserver.port=8474 
> remote_shell_port=1390
>
>
>
> Problem: REST API suddenly very slow response, situation for hours. When I 
> restart the server, API return to normal.
>
> $time wget localhost:8474/db/data
> --2015-09-16 07:36:09--  http <http://localhost:8474/db/data>: 
> <http://localhost:8474/db/data>//localhost:8474/db/data 
> <http://localhost:8474/db/data>
> Resolving localhost... 127.0.0.1
>
> ...

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